Parental gene:

CTAGE5, ENSG00000150527

Aliases:None
Description:CTAGE family, member 5 [Source:HGNC Symbol;Acc:7057]
Organism:Human (Homo sapiens)
Coordinates:14:39734487..39856156(+)


>ENSG00000150527
ATGGAGGAGCCCGGGGTTACCCCTCAACCGTATTTGGGGCTGCTCCTGGAGGAGCTACGCAGGGTTGTGGCAGCACTGCC
TGAAGGTATGAGACCAGATTCTAATCTTTATGGTTTTCCATGGGAATTGGTGATATGTGCAGCTGTTGTTGGATTTTTTG
CTGTTCTCTTTTTTTTGTGGAGAAGTTTTAGATCGGTTAGGAGTCGGCTTTATGTGGGACGAGAGAAAAAGCTTGCTCTA
ATGCTTTCTGGACTAATTGAAGAAAAAAGTAAACTACTTGAAAAATTTAGCCTTGTTCAAAAAGAGTATGAAGGCTATGA
AGTAGAGTCATCTTTAAAGGATGCCAGCTTTGAGAAGGAGGCAACAGAAGCACAAAGTTTGGAGGTAGAAAATCAAATGG
CAACCTGTGAAAAGCTGAACAGGTCCAATTCTGAACTTGAGGATGAAATACTCTGTCTAGAAAAAGAGTTAAAAGAAGAG
AAATCCAAACATTCTGAACAAGATGAATTGATGGCGGATATTTCAAAAAGGATACAGTCTCTAGAAGATGAGTCAAAATC
CCTCAAATCACAAGTAGCTGAAGCCAAAATGACCTTCAAGATATTTCAAATGAATGAAGAACGACTGAAGATAGCAATAA
AAGATGCTTTGAATGAAAATTCTCAACTTCAGGAAAGCCAGAAACAGCTTTTGCAAGAAGCTGAAGTATGGAAAGAACAA
GTGAGTGAACTTAATAAACAGAAAGTAACATTTGAAGACTCCAAAGTACATGCAGAACAAGTTCTAAATGATAAAGAAAG
TCACATCAAGACTCTGACTGAACGCTTGTTAAAGATGAAAGATTGGGCTGCTATGCTTGGAGAAGACATAACGGATGATG
ATAACTTGGAATTAGAAATGAACAGTGAATCGGAAAATGGTGCTTACTTAGATAATCCTCCAAAAGGAGCTTTGAAGAAA
CTGATTCATGCTGCTAAGTTAAATGCTTCTTTAAAAACCTTAGAAGGAGAAAGAAACCAAATTTATATTCAGTTGTCTGA
AGTTGATAAAACAAAGGAAGAGCTTACAGAGCATATTAAAAATCTTCAGACTGAACAAGCATCTTTGCAGTCAGAAAACA
CACATTTTGAAAATGAGAATCAGAAGCTTCAACAGAAACTTAAAGTAATGACTGAATTATATCAAGAAAATGAAATGAAA
CTCCACAGGAAATTAACAGTAGAGGAAAATTATCGGTTAGAGAAAGAAGAGAAACTTTCTAAAGTAGATGAAAAGATCAG
CCATGCCACTGAAGAGCTGGAGACCTATAGAAAGCGAGCCAAAGATCTTGAAGAAGAATTGGAGAGAACTATTCATTCTT
ATCAAGGGCAGATTATTTCCCATGAGAAAAAAGCACATGATAATTGGTTGGCAGCTCGGAATGCTGAAAGAAACCTCAAT
GATTTAAGGAAAGAAAATGCTCACAACAGACAAAAATTAACTGAAACAGAGCTTAAATTTGAACTTTTAGAAAAAGATCC
TTATGCACTCGATGTTCCAAATACAGCATTTGGCAGAGAGCATTCCCCATATGGTCCCTCACCATTGGGTTGGCCTTCAT
CTGAAACAAGAGCTTTTCTCTCTCCTCCAACTTTGTTGGAGGGTCCACTCAGACTCTCACCTTTGCTTCCAGGGGGAGGA
GGAAGAGGCTCACGAGGCCCAGGGAATCCTCTGGACCATCAGATTACCAATGAAAGAGGAGAATCAAGCTGTGATAGGTT
AACCGATCCTCATAGGGCTCCCTCTGACACTGGGTCTCTGTCACCTCCATGGGACCAGGACCGTAGGATGATGTTTCCTC
CGCCAGGACAATCATATCCTGATTCAGCCCTTCCTCCACAAAGGCAAGACAGATTTTGTTCTAATTCTGGTAGACTGTCT
GGACCAGCAGAACTCAGAAGTTTTAATATGCCTTCTTTGGATAAAATGGATGGGTCAATGCCTTCAGAAATGGAATCCAG
TAGAAATGATACCAAAGATGATCTTGGTAATTTAAATGTGCCTGATTCATCTCTCCCTGCTGAAAATGAAGCCACTGGCC
CTGGCTTTGTTCCTCCACCTCTTGCTCCAATCAGAGGTCCATTGTTTCCAGTGGATGCAAGAGGCCCATTCTTGAGAAGA
GGACCTCCTTTCCCCCCACCTCCTCCAGGAGCCATGTTTGGAGCTTCTCGAGATTATTTTCCACCAGGGGATTTCCCAGG
TCCACCACCTGCTCCATTTGCAATGAGAAATGTCTATCCACCGAGGGGTTTTCCTCCTTACCTTCCCCCAAGACCTGGAT
TTTTCCCCCCACCCCCACATTCTGAAGGTAGAAGTGAGTTCCCCTCAGGTTTGATTCCACCTTCAAATGAGCCTGCTACT
GAACATCCAGAACCACAGCAAGAAACCTGA

Library Parental gene expression (RPM)
bodymap2_liver 1 .20 RPM
bodymap2_lung 0 .95 RPM
bodymap2_breast 1 .09 RPM
bodymap2_adipose 0 .83 RPM
bodymap2_adrenal 1 .68 RPM
bodymap2_skeletal_muscle 0 .36 RPM
bodymap2_thyroid 2 .88 RPM
bodymap2_prostate 1 .11 RPM
bodymap2_colon 0 .66 RPM
bodymap2_testis 1 .64 RPM
bodymap2_brain 0 .96 RPM
bodymap2_heart 0 .63 RPM
bodymap2_white_blood_cells 1 .56 RPM
bodymap2_lymph_node 0 .91 RPM
bodymap2_ovary 1 .41 RPM
bodymap2_kidney 2 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016105 ortholog_one2many 4 retrogenes
retro_cjac_1747, retro_cjac_2711, retro_cjac_3217, retro_cjac_921,
Cavia porcellus ENSCPOG00000026514 possible_ortholog 2 retrogenes
retro_cpor_189, retro_cpor_727,
Homo sapiens ENSG00000258941 within_species_paralog 1 retrogene
retro_hsap_78,
Gorilla gorilla ENSGGOG00000011990 ortholog_one2one 1 retrogene
retro_ggor_936,
Nomascus leucogenys ENSNLEG00000004121 possible_ortholog 10 retrogenes
retro_nleu_1218, retro_nleu_1690, retro_nleu_2087, retro_nleu_2103, retro_nleu_2148, retro_nleu_2600, retro_nleu_2951, retro_nleu_3017, retro_nleu_3077, retro_nleu_688,
Pongo abelii ENSPPYG00000005768 ortholog_one2one 9 retrogenes
retro_pabe_1001, retro_pabe_1002, retro_pabe_1007, retro_pabe_1055, retro_pabe_1060, retro_pabe_1588, retro_pabe_2119, retro_pabe_29, retro_pabe_3024,
Pan troglodytes ENSPTRG00000006297 possible_ortholog 10 retrogenes
retro_ptro_1286, retro_ptro_1712, retro_ptro_2503, retro_ptro_2580, retro_ptro_2880, retro_ptro_466, retro_ptro_821, retro_ptro_826, retro_ptro_868, retro_ptro_876,
Ictidomys tridecemlineatus ENSSTOG00000015890 possible_ortholog 1 retrogene
retro_itri_95,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_640 87.44 100.00
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2. retro_hsap_1201 87.34 100.00
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3. retro_hsap_3691 85.71 99.88
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Download FASTA sequences of all ENSG00000150527 retrocopies