Parental gene: | ENSCPOG00000026514 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_133:2537789..2539865(+) |
>ENSCPOG00000026514
AGCCAACTGGTCACACAGCCTTGTGTGATGGAGTGGGCAGACACTATGAGTCTTTTGACCCTTCTTTGGATTTCATGGAG
AACTTTTCGTTGTGTTAGAAGTCGGTTGGCAGTCAGCAGAGAAAAACCACTGGCTCTCCAGCTCACAGGACTCCTGAAAG
AAAAGTGCCAACTCTTGGACCAACTCGACCAGCTTCAGAAAGAACACGAAGCCTTAGAGACAGCTCTCAAGGAGGTCCGC
CTAGAAGAGGAGGCCAGGGCAGCACAGTGTTTGGAGGCAACCAAGAAGAAGGTGTTGATGTTGTGGAACAGATCCAAGAT
TGTAGGGCAGATAGACCGCCTCCTCAAAGAGCGAAAAGAAGAGCAAGCAGAACGTGTTCGAAAACAGCAATCAGAGATGG
CAGAGACAGCAAACAGGATCGGGTCCCTGGCAGAGGAATTAACATCAGTGACTCCCGAGATAGCTAACATGAAACTCGCC
TTGAGGAACATGGGCATACAGCAGCTCCAGAGAGAAATGACAGTTGCTCTCAGTGAGAATGCCCAACTCCCCGAAAGCCA
CTCCCAGCTTTCCCAGGAAGCTCAACGCGGGAAGGAACGAGGGGCTGAAGTCAAGAGTCAACAGGAAAATGGTCCTGGCT
CAGGTCATCAGCCAAGAGTGCTTTTGGAGAAACCGGTCTATGGTGCTCGATTAAATGCGTCCTTAAAGACCACGGAAGAG
CAAAGAAACCAACTTCGCACTCAACTCTGGGAGGCAGAGAACACTGAGAAAGAACTGAAAAAATCTCTGTATCGTCTCCA
GACTAAAAAAGCGTCTCTGGAGTCAGCCAAGGCACAGCTGCAAGGCGAACACCAGAAGCTTCAGCAGAAGTTCAGAGGGA
TGGGTCAGATTCACCACCAAGCTGTGCTGCGCTGCCACACCAAACTGAGACAGCAGGCCAGAGTCGGGGCAGAGCAAGGA
AGGAAACTGCCCATACGGGAGGAGGAGGTGGGCCACAGTGCTCAAGAGCTGGAGACCTACAGGAAGATAGCCCAGGACAT
GCAGGAGGAGTGGGAGAAAACCATTCGCTCCCACCAAAGGCAGCTGACCTGCATGCAGAAGGAAGCCCGCAAGAACTGGG
CTGCAGCTGCCACTGCTGGAAGCCTGCTCCGGGAGTTAAGGAGGGGAAATGCTCGCACCAAAGAGATCCTGCGTGCCATG
GAGAAGAAGGCTTCCCACTTGGGCCAAGATCCTGACACCCATGGCGTGATGAAGAGCTCAGCTGGAAGACAGCATTGCCT
GCGTGGTCCTTCCCGCCGAAGTAGGCCAGGCCGAGGAAGGAGATCTGCTCACCTTAGTCTTCCAATGCTGTGGGAGGAGC
CGCTG
AGCCAACTGGTCACACAGCCTTGTGTGATGGAGTGGGCAGACACTATGAGTCTTTTGACCCTTCTTTGGATTTCATGGAG
AACTTTTCGTTGTGTTAGAAGTCGGTTGGCAGTCAGCAGAGAAAAACCACTGGCTCTCCAGCTCACAGGACTCCTGAAAG
AAAAGTGCCAACTCTTGGACCAACTCGACCAGCTTCAGAAAGAACACGAAGCCTTAGAGACAGCTCTCAAGGAGGTCCGC
CTAGAAGAGGAGGCCAGGGCAGCACAGTGTTTGGAGGCAACCAAGAAGAAGGTGTTGATGTTGTGGAACAGATCCAAGAT
TGTAGGGCAGATAGACCGCCTCCTCAAAGAGCGAAAAGAAGAGCAAGCAGAACGTGTTCGAAAACAGCAATCAGAGATGG
CAGAGACAGCAAACAGGATCGGGTCCCTGGCAGAGGAATTAACATCAGTGACTCCCGAGATAGCTAACATGAAACTCGCC
TTGAGGAACATGGGCATACAGCAGCTCCAGAGAGAAATGACAGTTGCTCTCAGTGAGAATGCCCAACTCCCCGAAAGCCA
CTCCCAGCTTTCCCAGGAAGCTCAACGCGGGAAGGAACGAGGGGCTGAAGTCAAGAGTCAACAGGAAAATGGTCCTGGCT
CAGGTCATCAGCCAAGAGTGCTTTTGGAGAAACCGGTCTATGGTGCTCGATTAAATGCGTCCTTAAAGACCACGGAAGAG
CAAAGAAACCAACTTCGCACTCAACTCTGGGAGGCAGAGAACACTGAGAAAGAACTGAAAAAATCTCTGTATCGTCTCCA
GACTAAAAAAGCGTCTCTGGAGTCAGCCAAGGCACAGCTGCAAGGCGAACACCAGAAGCTTCAGCAGAAGTTCAGAGGGA
TGGGTCAGATTCACCACCAAGCTGTGCTGCGCTGCCACACCAAACTGAGACAGCAGGCCAGAGTCGGGGCAGAGCAAGGA
AGGAAACTGCCCATACGGGAGGAGGAGGTGGGCCACAGTGCTCAAGAGCTGGAGACCTACAGGAAGATAGCCCAGGACAT
GCAGGAGGAGTGGGAGAAAACCATTCGCTCCCACCAAAGGCAGCTGACCTGCATGCAGAAGGAAGCCCGCAAGAACTGGG
CTGCAGCTGCCACTGCTGGAAGCCTGCTCCGGGAGTTAAGGAGGGGAAATGCTCGCACCAAAGAGATCCTGCGTGCCATG
GAGAAGAAGGCTTCCCACTTGGGCCAAGATCCTGACACCCATGGCGTGATGAAGAGCTCAGCTGGAAGACAGCATTGCCT
GCGTGGTCCTTCCCGCCGAAGTAGGCCAGGCCGAGGAAGGAGATCTGCTCACCTTAGTCTTCCAATGCTGTGGGAGGAGC
CGCTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 0 .00 RPM |
| SRP017611_kidney | 0 .00 RPM |
| SRP017611_brain | 0 .00 RPM |
| SRP040447_lung | 0 .00 RPM |
| SRP040447_skeletal_muscle | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016105 | possible_ortholog | 4 retrogenes | |
| Homo sapiens | ENSG00000150527 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000258941 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011990 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004121 | possible_ortholog | 10 retrogenes | |
| Pongo abelii | ENSPPYG00000005768 | possible_ortholog | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000006297 | possible_ortholog | 10 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000015890 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_189 | 78.34 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_727 | 86.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000026514 retrocopies