Parental gene:

NDFIP1, ENSG00000131507

Aliases:NDFIP1, N4WBP5
Description:Nedd4 family interacting protein 1 [Source:HGNC Symbol;Acc:17592]
Organism:Human (Homo sapiens)
Coordinates:5:141488069..141534005(+)


>ENSG00000131507
ATGGCGTTGGCGTTGGCGGCGCTGGCGGCGGTCGAGCCGGCCTGCGGCAGCCGGTACCAGCAGTTGCAGAATGAAGAAGA
GTCTGGAGAACCTGAACAGGCTGCAGGTGATGCTCCTCCACCTTACAGCAGCATTTCTGCAGAGAGCGCAGCATATTTTG
ACTACAAGGATGAGTCTGGGTTTCCAAAGCCCCCATCTTACAATGTAGCTACAACACTGCCCAGTTATGATGAAGCGGAG
AGGACCAAGGCTGAAGCTACTATCCCTTTGGTTCCTGGGAGAGATGAGGATTTTGTGGGTCGGGATGATTTTGATGATGC
TGACCAGCTGAGGATAGGAAATGATGGGATTTTCATGTTAACTTTTTTCATGGCATTCCTCTTTAACTGGATTGGGTTTT
TCCTGTCTTTTTGCCTGACCACTTCAGCTGCAGGAAGGTATGGGGCCATTTCAGGATTTGGTCTCTCTCTAATTAAATGG
ATCCTGATTGTCAGGTTTTCCACCTATTTCCCTGGATATTTTGATGGTCAGTACTGGCTCTGGTGGGTGTTCCTTGTTTT
AGGCTTTCTCCTGTTTCTCAGAGGATTTATCAATTATGCAAAAGTTCGGAAGATGCCAGAAACTTTCTCAAATCTCCCCA
GGACCAGAGTTCTCTTTATTTATTAA

Library Parental gene expression (RPM)
bodymap2_liver 149 .64 RPM
bodymap2_lung 174 .58 RPM
bodymap2_breast 177 .26 RPM
bodymap2_adipose 140 .26 RPM
bodymap2_adrenal 97 .05 RPM
bodymap2_skeletal_muscle 71 .13 RPM
bodymap2_thyroid 435 .74 RPM
bodymap2_prostate 218 .06 RPM
bodymap2_colon 136 .59 RPM
bodymap2_testis 189 .62 RPM
bodymap2_brain 550 .00 RPM
bodymap2_heart 105 .95 RPM
bodymap2_white_blood_cells 215 .98 RPM
bodymap2_lymph_node 120 .11 RPM
bodymap2_ovary 181 .24 RPM
bodymap2_kidney 252 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047747 ortholog_one2one 1 retrogene
retro_btau_766,
Callithrix jacchus ENSCJAG00000018271 ortholog_one2one 1 retrogene
retro_cjac_3175,
Equus caballus ENSECAG00000021907 ortholog_one2one 1 retrogene
retro_ecab_261,
Gorilla gorilla ENSGGOG00000004879 ortholog_one2one 1 retrogene
retro_ggor_859,
Macaca mulatta ENSMMUG00000016787 ortholog_one2one 1 retrogene
retro_mmul_846,
Pongo abelii ENSPPYG00000015896 ortholog_one2one 1 retrogene
retro_pabe_908,
Pan troglodytes ENSPTRG00000017358 ortholog_one2one 1 retrogene
retro_ptro_743,
Sarcophilus harrisii ENSSHAG00000002466 ortholog_one2one 1 retrogene
retro_shar_738,
Sus scrofa ENSSSCG00000025295 ortholog_one2many 1 retrogene
retro_sscr_301,
Ictidomys tridecemlineatus ENSSTOG00000005153 ortholog_one2one 1 retrogene
retro_itri_1454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1091 66.96 51.13
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Download FASTA sequences of all ENSG00000131507 retrocopies