Parental gene: | FAM64A, ENSG00000129195 |
| Aliases: | FAM64A, CATS, RCS1 |
| Description: | family with sequence similarity 64, member A [Source:HGNC Symbol;Acc:25483] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 17:6347734..6354789(+) |
>ENSG00000129195
ATGGCTTCTCGGTGGCAGAACATGGGGACCTCCGTGCGCCGGAGATCTCTCCAGCACCAGGAGCAGCTGGAGGACAGCAA
GGAGCTGCAGCCTGTGGTCAGCCATCAGGAGACCTCTGTAGGGGCCCTGGGGTCCCTGTGCAGACAGTTCCAAAGGAGGC
TGCCCCTGAGAGCCGTCAACCTCAACCTCCGCGCAGGGCCCTCCTGGAAACGCCTGGAAACCCCAGAGCCAGGTCAGCAG
GGCCTCCAGGCTGCAGCTCGCTCAGCTAAGAGTGCTTTGGGTGCCGTGTCCCAGAGAATCCAGGAGTCCTGCCAAAGTGG
CACCAAGTGGCTGGTGGAGACCCAGGTGAAGGCCAGGAGGCGGAAGAGAGGAGCACAGAAGGGCAGTGGATCCCCAACTC
ACAGCCTGAGCCAGAAGAGCACCCGGCTGTCTGGAGCCGCCCCTGCCCACTCAGCCGCAGACCCCTGGGAGAAGGAGCAT
CACCGCCTCTCTGTCCGGATGGGCTCACATGCCCACCCATTACGGCGATCAAGGCGGGAGGCTGCCTTCCGGAGCCCCTA
CTCCTCAACAGAGCCCCTCTGCTCTCCCAGCGAGTCTGACAGTGACCTAGAGCCTGTGGGGGCGGGAATTCAGCATCTCC
AGAAGCTGTCCCAAGAGCTAGATGAAGCCATTATGGCGGAAGAGAGGAAACAAGCCCTGTCTGACCGCCAAGGCTTCATA
CTCAAGGATGTCTATGCTTCCCCGTGA
ATGGCTTCTCGGTGGCAGAACATGGGGACCTCCGTGCGCCGGAGATCTCTCCAGCACCAGGAGCAGCTGGAGGACAGCAA
GGAGCTGCAGCCTGTGGTCAGCCATCAGGAGACCTCTGTAGGGGCCCTGGGGTCCCTGTGCAGACAGTTCCAAAGGAGGC
TGCCCCTGAGAGCCGTCAACCTCAACCTCCGCGCAGGGCCCTCCTGGAAACGCCTGGAAACCCCAGAGCCAGGTCAGCAG
GGCCTCCAGGCTGCAGCTCGCTCAGCTAAGAGTGCTTTGGGTGCCGTGTCCCAGAGAATCCAGGAGTCCTGCCAAAGTGG
CACCAAGTGGCTGGTGGAGACCCAGGTGAAGGCCAGGAGGCGGAAGAGAGGAGCACAGAAGGGCAGTGGATCCCCAACTC
ACAGCCTGAGCCAGAAGAGCACCCGGCTGTCTGGAGCCGCCCCTGCCCACTCAGCCGCAGACCCCTGGGAGAAGGAGCAT
CACCGCCTCTCTGTCCGGATGGGCTCACATGCCCACCCATTACGGCGATCAAGGCGGGAGGCTGCCTTCCGGAGCCCCTA
CTCCTCAACAGAGCCCCTCTGCTCTCCCAGCGAGTCTGACAGTGACCTAGAGCCTGTGGGGGCGGGAATTCAGCATCTCC
AGAAGCTGTCCCAAGAGCTAGATGAAGCCATTATGGCGGAAGAGAGGAAACAAGCCCTGTCTGACCGCCAAGGCTTCATA
CTCAAGGATGTCTATGCTTCCCCGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 0 .00 RPM |
| bodymap2_lung | 0 .11 RPM |
| bodymap2_breast | 0 .08 RPM |
| bodymap2_adipose | 0 .10 RPM |
| bodymap2_adrenal | 0 .10 RPM |
| bodymap2_skeletal_muscle | 0 .11 RPM |
| bodymap2_thyroid | 0 .38 RPM |
| bodymap2_prostate | 0 .12 RPM |
| bodymap2_colon | 0 .17 RPM |
| bodymap2_testis | 0 .38 RPM |
| bodymap2_brain | 0 .12 RPM |
| bodymap2_heart | 0 .09 RPM |
| bodymap2_white_blood_cells | 0 .10 RPM |
| bodymap2_lymph_node | 0 .09 RPM |
| bodymap2_ovary | 0 .73 RPM |
| bodymap2_kidney | 0 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006997 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012309 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000017760 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000020808 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009164 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000027433 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007877 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000008641 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008040 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2371 | 83.75 | 99.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3030 | 75.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_3071 | 84.58 | 99.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000129195 retrocopies