Parental gene:

ACTR3, ENSG00000115091

Aliases:ACTR3, ARP3
Description:ARP3 actin-related protein 3 homolog (yeast) [Source:HGNC Symbol;Acc:170]
Organism:Human (Homo sapiens)
Coordinates:2:114647536..114720173(+)


>ENSG00000115091
ATGGCGGGACGGCTGCCGGCCTGTGTGGTGGACTGTGGCACGGGGTATACAAAACTAGGATATGCTGGAAATACAGAACC
ACAGTTTATCATCCCTTCCTGTATTGCTATTAAGGAGTCAGCAAAAGTGGGTGATCAAGCTCAAAGGAGGGTGATGAAAG
GTGTTGATGACCTAGACTTCTTCATTGGTGATGAAGCAATAGAAAAACCTACATATGCAACAAAGTGGCCAATCCGCCAT
GGTATAGTTGAAGATTGGGACTTAATGGAAAGGTTTATGGAGCAAGTGATCTTTAAATATTTAAGGGCAGAACCTGAAGA
CCATTATTTTCTTTTGACTGAACCTCCATTGAATACTCCAGAAAACAGGGAATATACTGCTGAAATAATGTTTGAGTCCT
TCAATGTTCCAGGCTTGTACATTGCTGTGCAGGCTGTTCTTGCCTTAGCTGCATCTTGGACCTCAAGACAAGTAGGAGAA
CGGACGTTGACCGGTACGGTAATAGACAGTGGAGATGGTGTCACTCATGTCATTCCTGTGGCTGAAGGGTATGTGATTGG
CAGCTGTATTAAACACATTCCAATCGCAGGACGAGATATAACATATTTTATTCAGCAACTGCTGAGAGACCGAGAAGTAG
GAATCCCTCCAGAACAATCCTTGGAAACTGCTAAGGCAGTAAAGGAGCGCTATAGTTATGTCTGCCCAGATTTAGTAAAA
GAATTTAACAAGTATGATACAGATGGGTCAAAATGGATTAAACAGTATACTGGAATCAATGCTATCTCAAAGAAAGAGTT
TTCTATCGATGTTGGTTATGAGAGATTTTTGGGACCTGAAATCTTTTTTCATCCAGAGTTTGCTAATCCAGACTTTACAC
AACCTATCTCAGAAGTTGTAGATGAAGTAATTCAGAATTGTCCTATTGATGTCAGACGTCCTCTCTACAAGAATATTGTC
CTCTCTGGAGGTTCAACCATGTTCAGGGACTTTGGACGTCGCTTGCAAAGAGATTTGAAAAGAACTGTAGATGCCCGGCT
GAAATTAAGTGAGGAATTGAGTGGTGGTAGATTGAAGCCAAAACCTATTGATGTACAAGTCATTACACACCACATGCAGC
GATATGCAGTTTGGTTTGGAGGATCAATGCTGGCTTCCACGCCTGAGTTCTACCAAGTATGCCACACCAAAAAGGATTAT
GAAGAAATTGGACCTAGCATTTGTCGTCACAATCCAGTGTTTGGAGTCATGTCGTAA

Library Parental gene expression (RPM)
bodymap2_liver 81 .22 RPM
bodymap2_lung 314 .19 RPM
bodymap2_breast 167 .34 RPM
bodymap2_adipose 209 .43 RPM
bodymap2_adrenal 275 .99 RPM
bodymap2_skeletal_muscle 80 .44 RPM
bodymap2_thyroid 178 .54 RPM
bodymap2_prostate 235 .80 RPM
bodymap2_colon 264 .21 RPM
bodymap2_testis 219 .07 RPM
bodymap2_brain 175 .85 RPM
bodymap2_heart 105 .58 RPM
bodymap2_white_blood_cells 791 .76 RPM
bodymap2_lymph_node 239 .15 RPM
bodymap2_ovary 227 .97 RPM
bodymap2_kidney 243 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003401 ortholog_one2one 1 retrogene
retro_btau_672,
Callithrix jacchus ENSCJAG00000014091 ortholog_one2one 4 retrogenes
retro_cjac_3602, retro_cjac_3813, retro_cjac_385, retro_cjac_4005,
Homo sapiens ENSG00000133627 within_species_paralog 7 retrogenes
retro_hsap_1676, retro_hsap_2126, retro_hsap_2540, retro_hsap_2966, retro_hsap_4334, retro_hsap_4921, retro_hsap_561,
Gorilla gorilla ENSGGOG00000011346 ortholog_one2one 1 retrogene
retro_ggor_2921,
Mustela putorius furo ENSMPUG00000010717 ortholog_one2one 1 retrogene
retro_mputfur_1275,
Mus musculus ENSMUSG00000026341 ortholog_one2one 1 retrogene
retro_mmus_3653,
Nomascus leucogenys ENSNLEG00000011619 ortholog_one2one 2 retrogenes
retro_nleu_1077, retro_nleu_2364,
Pongo abelii ENSPPYG00000012798 ortholog_one2one 1 retrogene
retro_pabe_3647,
Pan troglodytes ENSPTRG00000012388 ortholog_one2one 2 retrogenes
retro_ptro_3118, retro_ptro_955,
Vicugna pacos ENSVPAG00000009479 ortholog_one2one 1 retrogene
retro_vpac_468,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1391 71.96 75.56
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2. retro_hsap_4694 81.32 82.06
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Download FASTA sequences of all ENSG00000115091 retrocopies