Parental gene: | PERP, ENSG00000112378 |
| Aliases: | PERP, KCP1, KRTCAP1, PIGPC1, THW, dJ496H19.1 |
| Description: | PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 6:138409641..138428648(-) |
>ENSG00000112378
ATGATCCGCTGCGGCCTGGCCTGCGAGCGCTGCCGCTGGATCCTGCCCCTGCTCCTACTCAGCGCCATCGCCTTCGACAT
CATCGCGCTGGCCGGCCGCGGCTGGTTGCAGTCTAGCGACCACGGCCAGACGTCCTCGCTGTGGTGGAAATGCTCCCAAG
AGGGCGGCGGCAGCGGGTCCTACGAGGAGGGCTGTCAGAGCCTCATGGAGTACGCGTGGGGTAGAGCAGCGGCTGCCATG
CTCTTCTGTGGCTTCATCATCCTGGTGATCTGTTTCATCCTCTCCTTCTTCGCCCTCTGTGGACCCCAGATGCTTGTCTT
CCTGAGAGTGATTGGAGGTCTCCTTGCCTTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCCGTGAAGTACA
CCCAGACCTTCACCCTTCATGCCAACCCTGCTGTCACTTACATCTATAACTGGGCCTACGGCTTTGGGTGGGCAGCCACG
ATTATCCTGATTGGCTGTGCCTTCTTCTTCTGCTGCCTCCCCAACTACGAAGATGACCTTCTGGGCAATGCCAAGCCCAG
GTACTTCTACACATCTGCCTAA
ATGATCCGCTGCGGCCTGGCCTGCGAGCGCTGCCGCTGGATCCTGCCCCTGCTCCTACTCAGCGCCATCGCCTTCGACAT
CATCGCGCTGGCCGGCCGCGGCTGGTTGCAGTCTAGCGACCACGGCCAGACGTCCTCGCTGTGGTGGAAATGCTCCCAAG
AGGGCGGCGGCAGCGGGTCCTACGAGGAGGGCTGTCAGAGCCTCATGGAGTACGCGTGGGGTAGAGCAGCGGCTGCCATG
CTCTTCTGTGGCTTCATCATCCTGGTGATCTGTTTCATCCTCTCCTTCTTCGCCCTCTGTGGACCCCAGATGCTTGTCTT
CCTGAGAGTGATTGGAGGTCTCCTTGCCTTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCCGTGAAGTACA
CCCAGACCTTCACCCTTCATGCCAACCCTGCTGTCACTTACATCTATAACTGGGCCTACGGCTTTGGGTGGGCAGCCACG
ATTATCCTGATTGGCTGTGCCTTCTTCTTCTGCTGCCTCCCCAACTACGAAGATGACCTTCTGGGCAATGCCAAGCCCAG
GTACTTCTACACATCTGCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 156 .06 RPM |
| bodymap2_lung | 124 .72 RPM |
| bodymap2_breast | 158 .76 RPM |
| bodymap2_adipose | 96 .33 RPM |
| bodymap2_adrenal | 24 .09 RPM |
| bodymap2_skeletal_muscle | 11 .73 RPM |
| bodymap2_thyroid | 93 .72 RPM |
| bodymap2_prostate | 221 .02 RPM |
| bodymap2_colon | 170 .62 RPM |
| bodymap2_testis | 41 .01 RPM |
| bodymap2_brain | 12 .10 RPM |
| bodymap2_heart | 101 .81 RPM |
| bodymap2_white_blood_cells | 7 .19 RPM |
| bodymap2_lymph_node | 35 .41 RPM |
| bodymap2_ovary | 46 .17 RPM |
| bodymap2_kidney | 66 .72 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020097 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000019024 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028340 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004872 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000013979 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001473 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000997 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014930 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004238 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011669 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000017043 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1523 | 82.32 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_2901 | 68.57 | 70.98 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000112378 retrocopies