Parental gene:

PERP, ENSCJAG00000019024

Aliases:None
Description:PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:138626398..138643820(-)


>ENSCJAG00000019024
CCGCTGCGGCTTGCCTGCGAGCGCTGCCGCTGGATCCTGCCCTGCTCTGCTCAGCGCCATCGCTTCGACATCATCGCACT
GGCCGGCCGCGGCTGGCTGCAGTCGAACGACCACGTCCAGACGTCCTCGCTGTGGTGGAGATGTTTCCACGAGGGCGGCG
GCAGCGGGTACGAGGACGGCTGTCAGAGCCTCATGGATTACGCGTGGGGTAGAGCAGCAGCTGCCATGCTCTTCTGTGGC
TTCATCATCCTGGTGATCTGTTTCATCCTCTCTTTCTTCGCCCTCTGTGGACCCCAGATGCTTGTCTTCCTAAGAGTGAT
TGGAGGTCTCCTTGCCTTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCTGTGAAGTACACCCAGACCTTCA
ACCTTCACGCCAACCCCGCTATCACTTACATCTACAACTGGGCCTATGGCTTTGGGTGGGCAGCCACGATTATCCTGATC
GGCTGTGCCTTTTTCTTCTGCTGCCTCCCAAACTACGAAGATGACCTCCTGGGCAATGCCAAGCCTAGGTACTTCTACAC
CTCTGCCTAA

Library Parental gene expression (RPM)
SRP051959_spleen 2 .44 RPM
SRP051959_skeletal_muscle 4 .63 RPM
SRP051959_lymph_node 1 .76 RPM
SRP051959_lung 17 .37 RPM
SRP051959_liver 15 .51 RPM
SRP051959_kidney 22 .96 RPM
SRP051959_heart 29 .68 RPM
SRP051959_colon 68 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020097 ortholog_many2many 1 retrogene
retro_btau_165,
Homo sapiens ENSG00000112378 ortholog_one2one 2 retrogenes
retro_hsap_1523, retro_hsap_2901,
Gorilla gorilla ENSGGOG00000028340 ortholog_one2one 1 retrogene
retro_ggor_1165,
Macropus eugenii ENSMEUG00000004872 ortholog_one2many 1 retrogene
retro_meug_845,
Microcebus murinus ENSMICG00000013979 ortholog_one2many 1 retrogene
retro_mmur_353,
Myotis lucifugus ENSMLUG00000001473 ortholog_one2many 1 retrogene
retro_mluc_2287,
Macaca mulatta ENSMMUG00000000997 ortholog_one2one 1 retrogene
retro_mmul_2156,
Nomascus leucogenys ENSNLEG00000014930 ortholog_one2one 2 retrogenes
retro_nleu_1934, retro_nleu_631,
Oryctolagus cuniculus ENSOCUG00000004238 ortholog_many2many 1 retrogene
retro_ocun_170,
Otolemur garnettii ENSOGAG00000011669 ortholog_one2many 1 retrogene
retro_ogar_631,
Pongo abelii ENSPPYG00000017043 ortholog_one2one 3 retrogenes
retro_pabe_1267, retro_pabe_2400, retro_pabe_2416,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3992 90.48 75.13
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Download FASTA sequences of all ENSCJAG00000019024 retrocopies