Parental gene:

DCAF13, ENSFCAG00000027256

Aliases:None
Description:DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:24535]
Organism:Cat (Felis catus)
Coordinates:F2:48555758..48583622(+)


>ENSFCAG00000027256
ATGAAGGTGAAGATGCTGAGCCGGAACCCGGACAACTATGTCCGCGAAACCAAGCTGGACTTACAAAGAGTTCCAAGAAA
CTATGATCCTACCTTACATCCTTTTGAAGTCCCGCGAGAGTATGTAAGAGCTTTAAATGCTACCAAATTGGAACGGGTAT
TTGCAAAACCATTCCTTGCTTCCCTGGATGGTCACCGAGATGGAGTCAATTGCTTGGCAAAGCACCCAAAGAGCCTGGCT
ACTGTCCTTTCTGGGGCATGTGATGGAGAGGTTAGAATTTGGAACTTGACTAAACGAAAATGTATCCGTACGATACAAGC
CCATGAGGGTTTTGTACGAGGAATATGTACTCGCTTTTGTGGGACTTCTTTCTTTACTGTTGGTGATGACAAAACTGTGA
AGCAGTGGAAAATGGATGGACCAGGCTATGGAGAAGAGGAGGAACCGTTGCATACAATATTAGGAAAGACAGTATATACA
GGGATTGATCATCACTGGAAGGAAGCTGTTTTTGCCACATGTGGACAGCAAGTAGACATTTGGGATGAACAAAGAACAAG
TCCTATATGTTCAATGACCTGGGGATTCGACAGTATAAGTAGTGTTAAATTTAACCCAATTGAGACATTTCTCTTGGGAA
GTTGTGCTTCTGACAGGAATATAGTACTATATGACATGAGGCAAGCTACTCCCCTGAAAAAGGTCATCTTAGATATGAGA
ACAAACACAATTTGTTGGAACCCTATGGAAGCTTTCATTTTTACTGCAGCAAATGAAGATTACAACTTATATACTTTCGA
TATGCGTGCACTGGACACTCCTGTAATGGTACATATGGATCATGTATCTGCGGTGCTTGATGTGGATTATTCTCCGACTG
GGAAAGAGTTTGTGTCTGCTAGTTTTGATAAATCTATTCGAATCTTTCCTGTGGACAAAAGTAGAAGCAGGGAAGTCTAT
CACACAAAGAGAATGCAACATGTTATCTGTGTAAAATGGACTTCTGACAGCAAATATATTATGTGTGGATCTGATGAAAT
GAACATTCGTCTGTGGAAAGCTAATGCTTCTGAAAAGTTGGGTGTGCTTACATCACGAGAAAAAGCAGCCAAAGATTATA
ACCAGAAATTGAAAGAGAAATTTCAACATCATCCTCATATAAAACGCATTGCTCGTCACCGACATCTACCAAAATCCATC
TACAGTCAGATTCAGGAACAGCGCATCATGAAAGAAGCTCGTCGACGAAAGGAAGTGAATCGTCTCAAACATAGCAAGCC
TGGATCTGTATCGATTGTGTCGGAGAAGAAGAAACACATAGTGGCAGTTGTGAAATAA

Library Parental gene expression (RPM)
SRP017611_liver 9 .10 RPM
SRP017611_kidney 26 .69 RPM
SRP017611_brain 14 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001595 ortholog_one2one 3 retrogenes
retro_amel_1453, retro_amel_1723, retro_amel_399,
Canis familiaris ENSCAFG00000000663 ortholog_one2one 3 retrogenes
retro_cfam_1309, retro_cfam_1533, retro_cfam_305,
Callithrix jacchus ENSCJAG00000016181 ortholog_one2one 2 retrogenes
retro_cjac_3083, retro_cjac_612,
Homo sapiens ENSG00000164934 ortholog_one2one 1 retrogene
retro_hsap_1498,
Gorilla gorilla ENSGGOG00000015124 ortholog_one2one 1 retrogene
retro_ggor_1150,
Myotis lucifugus ENSMLUG00000007375 ortholog_one2one 1 retrogene
retro_mluc_2048,
Nomascus leucogenys ENSNLEG00000003791 ortholog_one2one 1 retrogene
retro_nleu_1718,
Otolemur garnettii ENSOGAG00000002277 ortholog_one2one 1 retrogene
retro_ogar_305,
Pongo abelii ENSPPYG00000018809 ortholog_one2one 2 retrogenes
retro_pabe_1249, retro_pabe_3211,
Pan troglodytes ENSPTRG00000020493 ortholog_one2one 1 retrogene
retro_ptro_1017,
Sarcophilus harrisii ENSSHAG00000006588 ortholog_one2one 1 retrogene
retro_shar_507,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1840 75.46 85.62
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Download FASTA sequences of all ENSFCAG00000027256 retrocopies