Parental gene:

RPS28, ENSFCAG00000024931

Aliases:None
Description:ribosomal protein S28 [Source:HGNC Symbol;Acc:10418]
Organism:Cat (Felis catus)
Coordinates:A2:5551743..5552528(-)


>ENSFCAG00000024931
ATGGACACGAGCCGTGTGCAGCCCATCAAACTGGCCAGGGTCACCAAGGTGCTGGGCAGGACCGGCTCGCAGGGACAGTG
CACGCAGGTGCGCGTGGAGTTCATGGACGACACGAGCCGCTCCATCATCCGCAACGTGAAAGGTCCTGTGCGTGAGGGCG
ACGTGCTCACCCTCTTGGAGTCAGAGCGAGAAGCTCGGAGGTTGCGC

Library Parental gene expression (RPM)
SRP017611_liver 23 .15 RPM
SRP017611_kidney 65 .65 RPM
SRP017611_brain 16 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004917 ortholog_one2one 1 retrogene
retro_amel_1359,
Loxodonta africana ENSLAFG00000029923 ortholog_one2one 2 retrogenes
retro_lafr_168, retro_lafr_755,
Macaca mulatta ENSMMUG00000028895 possible_ortholog 3 retrogenes
retro_mmul_122, retro_mmul_182, retro_mmul_807,
Monodelphis domestica ENSMODG00000003890 possible_ortholog 1 retrogene
retro_mdom_291,
Mus musculus ENSMUSG00000067288 ortholog_one2many 3 retrogenes
retro_mmus_2949, retro_mmus_3283, retro_mmus_91,
Oryctolagus cuniculus ENSOCUG00000021484 ortholog_one2one 2 retrogenes
retro_ocun_1230, retro_ocun_1799,
Rattus norvegicus ENSRNOG00000042886 possible_ortholog 2 retrogenes
retro_rnor_95, retro_rnor_96,
Sus scrofa ENSSSCG00000013597 ortholog_one2one 3 retrogenes
retro_sscr_132, retro_sscr_191, retro_sscr_808,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_611 69.57 98.55
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2. retro_fcat_752 59.38 92.75
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3. retro_fcat_1130 79.41 98.55
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Download FASTA sequences of all ENSFCAG00000024931 retrocopies