Parental gene:

GTF2F2, ENSFCAG00000002105

Aliases:None
Description:general transcription factor IIF, polypeptide 2, 30kDa [Source:HGNC Symbol;Acc:4653]
Organism:Cat (Felis catus)
Coordinates:A1:25377364..25532820(-)


>ENSFCAG00000002105
ATGGCCGAACGTGGGGAACTCGATTTGACCGGCGCCAAACAGAACACCGGAGTGTGGCTCGTCAAGGTTCCTAAATATTT
GTCCCAGCAATGGGCTAAAGCCCCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCTAAGAATCAAGGAAGGACTGAGG
TGTCATTTACTTTGAATGAGGATCTTGCAAATATTCACGATATTGGCGGAAAACCAGCTTCTGTCAGCACCCCTAGAGAA
CATCCATTTGTCTTACAAAGTGTTGGAGGACAGACATTAACAGTCTTTACTGAGAGCTCATCAGATAAACTTTCATTGGA
AGGAATAGTCGTACAAAGAGCTGAATGCCGACCTGCTGCCAGTGAAAACTACATGAGATTAAAGAGATTGCAAATAGAAG
AATCTTCCAAACCTGTAAGGCTATCACAGCAACTGGACAAAGTGGTGACAACTAATTATAAGCCTGTTGCTAATCATCAA
TACAATATTGAATATGAAAGGAAAAAGAAAGAAGATGGAAAACGAGCTCGAGCTGATAAACAACACGTTTTAGACATGCT
ATTTTCAGCATTTGAGAAACATCAGTATTACAATCTTAAGGACTTGGTGGACATCACAAAACAACCTGTGGGCTACCTAA
AGGAAATCTTAAAAGAAATTGGTGTGCAGAACGTAAAAGGAACCCACAAAAACACATGGGAGCTGAAGCCAGAGTATAGA
CATTATCAAGGAGAAGAAAAGAGTGATTAA

Library Parental gene expression (RPM)
SRP017611_liver 7 .48 RPM
SRP017611_kidney 8 .45 RPM
SRP017611_brain 9 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000028333 ortholog_one2one 1 retrogene
retro_acar_174,
Bos taurus ENSBTAG00000034495 ortholog_one2one 2 retrogenes
retro_btau_1753, retro_btau_208,
Choloepus hoffmanni ENSCHOG00000007391 ortholog_one2one 1 retrogene
retro_chof_1718,
Myotis lucifugus ENSMLUG00000010505 ortholog_one2many 1 retrogene
retro_mluc_58,
Monodelphis domestica ENSMODG00000025484 ortholog_one2many 1 retrogene
retro_mdom_231,
Nomascus leucogenys ENSNLEG00000002097 ortholog_one2many 1 retrogene
retro_nleu_2440,
Nomascus leucogenys ENSNLEG00000002106 ortholog_one2many 1 retrogene
retro_nleu_742,
Procavia capensis ENSPCAG00000005868 ortholog_one2one 3 retrogenes
retro_pcap_102, retro_pcap_173, retro_pcap_375,
Pongo abelii ENSPPYG00000005333 possible_ortholog 1 retrogene
retro_pabe_93,
Pteropus vampyrus ENSPVAG00000014092 ortholog_one2one 1 retrogene
retro_pvam_1490,
Rattus norvegicus ENSRNOG00000029316 ortholog_one2one 1 retrogene
retro_rnor_1288,
Ictidomys tridecemlineatus ENSSTOG00000006891 possible_ortholog 1 retrogene
retro_itri_19,
Tursiops truncatus ENSTTRG00000002729 ortholog_one2one 2 retrogenes
retro_ttru_1003, retro_ttru_850,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_526 87.70 100.00
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Download FASTA sequences of all ENSFCAG00000002105 retrocopies