Parental gene: | DNAJA1, ENSETEG00000016984 |
| Aliases: | None |
| Description: | DnaJ (Hsp40) homolog, subfamily A, member 1 [Source:HGNC Symbol;Acc:5229] |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | scaffold_234376:1093..7101(-) |
>ENSETEG00000016984
ATGGTGAAAGAAACCACGTACTATGATGTTTTGGGGGTCAAACCCAGTGCCACCCAGGAAGAGCTGAAAAAAGCTTACCG
GAAACTGGCCTTGAAGTACCATCCTGATAAGAATCCAAATGAAGGCGAGAAGTTTAAACAGATTTCTCAAGCATATGAGG
TGCTTTCTGATGCCAAGAAAAGAGAACTGTATGACAAAGGAGGCGAGCAGGCCATCAAGGAGGGTGGAGCAGGCGGTGGA
TTTGGTTCCCCGATGGACATCTTTGATATGTTCTTTGGAGGCGGCGGACGGATGCAGAGAGAAAGGAGAGGAAAAAACGT
GGTGCACCAACTCTCAGTAACATTAGAAGATTTGTATAATGGTGCAACAAGAAAACTGGCCCTGCAAAAGAATGTGATTT
GTGACAAATGTGAAGGCCGAGGCGGTAAGAAAGGAGCCGTATGCTGTCCTAACTGCCGTGGTACTGGGATGCCGATACGA
ATCCATCAGATAGGGCCTGGAATGGTGCAGCAAATTAAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAACGGATCAG
CCCTAAAGACAGATGTAAAAGTTGCAATGGAAGGAAGATCGTTCGTGAGAAGAAGATTCTAGAAGTTCATATTGACAAAG
GCATGAAAGACGGCCAGAAGATCACATTCCACGGTGAAGGAGACCAAGAGCCTGGACTGGAGCCAGGAGATATTATTATT
GTTTTAGATCAGAAGGACCATGCTGTTTTTACC
ATGGTGAAAGAAACCACGTACTATGATGTTTTGGGGGTCAAACCCAGTGCCACCCAGGAAGAGCTGAAAAAAGCTTACCG
GAAACTGGCCTTGAAGTACCATCCTGATAAGAATCCAAATGAAGGCGAGAAGTTTAAACAGATTTCTCAAGCATATGAGG
TGCTTTCTGATGCCAAGAAAAGAGAACTGTATGACAAAGGAGGCGAGCAGGCCATCAAGGAGGGTGGAGCAGGCGGTGGA
TTTGGTTCCCCGATGGACATCTTTGATATGTTCTTTGGAGGCGGCGGACGGATGCAGAGAGAAAGGAGAGGAAAAAACGT
GGTGCACCAACTCTCAGTAACATTAGAAGATTTGTATAATGGTGCAACAAGAAAACTGGCCCTGCAAAAGAATGTGATTT
GTGACAAATGTGAAGGCCGAGGCGGTAAGAAAGGAGCCGTATGCTGTCCTAACTGCCGTGGTACTGGGATGCCGATACGA
ATCCATCAGATAGGGCCTGGAATGGTGCAGCAAATTAAGTCTGTGTGCATGGAGTGCCAGGGCCATGGGGAACGGATCAG
CCCTAAAGACAGATGTAAAAGTTGCAATGGAAGGAAGATCGTTCGTGAGAAGAAGATTCTAGAAGTTCATATTGACAAAG
GCATGAAAGACGGCCAGAAGATCACATTCCACGGTGAAGGAGACCAAGAGCCTGGACTGGAGCCAGGAGATATTATTATT
GTTTTAGATCAGAAGGACCATGCTGTTTTTACC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007589 | possible_ortholog | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000001818 | possible_ortholog | 23 retrogenes |
retro_cfam_1111, retro_cfam_1153, retro_cfam_1218, retro_cfam_1229, retro_cfam_1315, retro_cfam_1352, retro_cfam_1420, retro_cfam_1457, retro_cfam_1520, retro_cfam_1668, retro_cfam_1833, retro_cfam_1941, retro_cfam_1949, retro_cfam_1994, retro_cfam_2004, retro_cfam_2162, retro_cfam_352, retro_cfam_391, retro_cfam_419, retro_cfam_749, retro_cfam_751, retro_cfam_923, retro_cfam_993,
|
| Echinops telfairi | ENSETEG00000004320 | within_species_paralog | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007030 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000003384 | ortholog_one2one | 7 retrogenes | |
| Mustela putorius furo | ENSMPUG00000004231 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000012366 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_219 | 68.03 | 57.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_482 | 77.78 | 59.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_623 | 65.76 | 72.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_etel_1015 | 94.07 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_etel_1454 | 64.12 | 51.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_etel_1751 | 64.41 | 86.45 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000016984 retrocopies