Parental gene:

GLYR1, ENSEEUG00000011783

Aliases:None
Description:glyoxylate reductase 1 homolog (Arabidopsis) [Source:HGNC Symbol;Acc:24434]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_612:19167..33767(-)


>ENSEEUG00000011783
GCCTGGATCAAAGTGGAGCAGCTGAAGCCGTATCATGCACACAAAGAGGAAATGATCAAGAACAAAGGCAAACGGTTCCA
GCAAGCTGTGGATGCCGTGGAGGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCTCACCATCCCCGAGTCCA
GCACTGTGAAGGGGATGATGGCCGGCCCCATGGCTGCCTTCAAGTGGCAGCCGACCGTGAATGAGCCCGTAAAAGATGCA
GACCCCCATTTCCATCACTTTCTGCTCAGCCAAACGGAGAAGCCGACTGTCTGCTACCAGGCCATCACAAAGAAGTTGAA
AATCTGCGAAGAGGAGACAGGGTCCACCTCCATCCAGGCAGCAGACAGCACAGCCGTGAATGGCAGCATCACACCCACAG
ACAAAAAGATAGGATTTTTGGGCCTTGGCCTCATGGGAAGTGGTATCGTCTCCAACTTGCTAAAAATGGGTCACACAGTA
ACTGTCTGGAATCGGACTGCAGAAAAGTGTGATTTGTTCATCCAGGAGGGGGCCCGCCTAGGAAGAACCCCCGCTGAAGT
CGTTTCTACTTGTGACATCACCTTCGCCTGCGTGTCGGACCCAAAGGCAGCCAAGGATCTGGTGCTGGGCCCCAGTGGAG
TGCTGCAGGGCATCCGCCCCGGGAAGTGCTACGTGGACATGTCGACAGTGGATGCTGACACAGTCACCGAATTGGCCCAG
GTGATTGTGTCCAGGGGGGGCCGCTTTCTGGAAGCCCCGGTCTCAGGGAATCAGCAGCTGTCTAATGATGGGATGCTGGT
GATCTTAGCAGCCGGAGACAGGGGCTTATATGAGGACTGCAGCAGCTGCTTCCAGGCCATGGGGAAGACCTCCTTCTTCC
TAGGTGAGGTGGGCAACGCAGCCAAGATGATGCTGATCGTGAACATGGTCCAGGGGAGCTTCATGGCCACCATCGCCGAG
GGGTTGACCCTGGCCCAAGTGACAGGCCAGTCTCAGCAGACACTCTTGGATATCCTCAATCAGGGACAGTTGGCCAGCAT
CTTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGCAACTTTAAGCCTGATTTCTACCTGAAGTACATTCAGAAGGATC
TCGGCTTAACCATCGCGCTGGGTGATGCAGTCAATCACCCCACTCCCATGGGGGCTGCAGCCAATNNNGTGTACAAAAGA
GCCAAGGCACTGGACCAGTCTGACAATGACATGTCTGCCGTGTACCGAGCCTATATACACTAA

Library Parental gene expression (RPM)
SRP017611_liver 24 .76 RPM
SRP017611_kidney 51 .57 RPM
SRP017611_brain 63 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000019912 ortholog_one2one 1 retrogene
retro_cjac_2514,
Homo sapiens ENSG00000140632 ortholog_one2one 1 retrogene
retro_hsap_2432,
Gorilla gorilla ENSGGOG00000016258 ortholog_one2one 1 retrogene
retro_ggor_1512,
Macaca mulatta ENSMMUG00000009567 ortholog_one2one 1 retrogene
retro_mmul_621,
Nomascus leucogenys ENSNLEG00000009950 ortholog_one2one 1 retrogene
retro_nleu_240,
Oryctolagus cuniculus ENSOCUG00000010486 ortholog_one2one 1 retrogene
retro_ocun_680,
Pongo abelii ENSPPYG00000007072 ortholog_one2one 1 retrogene
retro_pabe_1791,
Pan troglodytes ENSPTRG00000007730 ortholog_one2one 1 retrogene
retro_ptro_1404,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_477 86.93 74.80
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Download FASTA sequences of all ENSEEUG00000011783 retrocopies