Parental gene:

GLYR1, ENSCJAG00000019912

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:4895588..4937899(-)


>ENSCJAG00000019912
ATGGCGGCTGTGAGTCTGCGGCTCGGCGACTTGGTGTGGGGGAAACTCGGCCGGTATCCTCCTTGGCCAGGAAAGATTGT
TAATCCACCAAAGGACCTGAAGAAACCTCGTGGAAAGAAATGCTTCTTTGTGAAATTTTTCGGAACAGAAGACCATGCCT
GGATCAAAGTGGAACAGCTGAAGCCATATCATGCTCATAAAGAGGAAATGATAAAAATTAACAAGGGTAAACGATTCCAG
CAAGCGGTGGATGCCGTCGAAGAGTTCCTCAGGAGAGCCAAAGGGAAAGACCAGACGTCATCCCACAATTCTGCTGATGA
CAAGAATCGACGTAATTCCAGTGAGGAGAGAAGTAGGCCAAACTCAGGTGATGAGAAGCGCAAACTTAGCCTGTCTGAAG
GGAAGGTGAAGAAGAACGTGGGAGAAGGAAAGAAGAGGGTGTCTTCAGGCTCTTCAGAGAGAGGCTCCAAATCCCCTCTG
AAAAGAGCCCAAGAGCAAAGTCCCCGGAAGCGGGGTCGGCCCCCAAAGGATGAGAAGGATCTCACCATCCCAGAGTCTAG
TACCGTGAAGGGGATGATGGCCGGACCAATGGCCACGTTTAAATGGCAGCCGACCGCAAGCGAGCCTGTTAAAGATGCAG
ATCCTCATTTCCATCATTTCCTGCTAAGCCAAACAGAAAAGCCAGCTGTCTGTTACCAGGCAATCACAAAGAAGTTGAAA
ATATGTGAAGAGGAAACTGGCTCCACCTCCATCCAGGCAGCTGACAGCACGGCGGTGAATGGCAGCATCACACCCACAGA
CAAAAAGATAGGATTTTTGGGCCTTGGTCTCATGGGAAGTGGAATCGTCTCTAACTTGCTAAAAATGGGTCACACGGTGA
CTGTCTGGAACCGCACTGCAGAGAAATGTGATTTGTTCATCCAGGAGGGGGCCCGCCTAGGAAGAACCCCCGCTGAAGTC
GTCTCAACCTGTGACATCACTTTTGCTTGTGTGTCGGATCCCAAGGCGGCCAAGGACCTGGTGCTGGGCCCCAGTGGTGT
ACTGCAAGGGATCCGCCCTGGGAAGTGCTACGTGGACATGTCAACAGTGGACGCTGACACGGTCACTGAGCTGGCCCAGG
TGATTGTGTCCAGGGGGGGGCGCTTTCTGGAGGCCCCCGTCTCAGGGAATCAGCAGCTGTCTAATGATGGGATGTTGGTG
ATCTTAGCGGCTGGAGACAGGGGCTTATACGAGGACTGCAGCAGCTGCTTCCAGGCGATGGGGAAGACCTCCTTCTTCCT
AGGTGAAGTGGGCAACGCAGCCAAGATGATGCTGATTGTGAACATGGTCCAAGGGAGCTTCATGGCCACTATCGCCGAGG
GGCTGACCCTGGCCCAGGTGACAGGCCAGTCCCAGCAGACACTCTTGGACATCCTCAATCAGGGACAGTTGGCCAGCATC
TTCCTGGACCAGAAGTGCCAAAATATCCTGCAAGGAAACTTTAAGCCTGATTTCTACCTGAAATACATTCAGAAGGATCT
CCGCTTAGCCATTGCGCTGGGCGATGCGGTCAACCATCCGACTCCCATGGCAGCTGCAGCCAACGAGGTATACAAAAGAG
CCAAGGCGCTGGACCAGTCCGACAACGATATGTCTGCCGTGTACCGAGCCTACATACACTAA

Library Parental gene expression (RPM)
SRP051959_spleen 32 .84 RPM
SRP051959_skeletal_muscle 22 .73 RPM
SRP051959_lymph_node 34 .38 RPM
SRP051959_lung 33 .25 RPM
SRP051959_liver 24 .30 RPM
SRP051959_kidney 41 .55 RPM
SRP051959_heart 23 .42 RPM
SRP051959_colon 27 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000011783 ortholog_one2one 1 retrogene
retro_eeur_477,
Homo sapiens ENSG00000140632 ortholog_one2one 1 retrogene
retro_hsap_2432,
Gorilla gorilla ENSGGOG00000016258 ortholog_one2one 1 retrogene
retro_ggor_1512,
Macaca mulatta ENSMMUG00000009567 ortholog_one2one 1 retrogene
retro_mmul_621,
Nomascus leucogenys ENSNLEG00000009950 ortholog_one2one 1 retrogene
retro_nleu_240,
Oryctolagus cuniculus ENSOCUG00000010486 ortholog_one2one 1 retrogene
retro_ocun_680,
Pongo abelii ENSPPYG00000007072 ortholog_one2one 1 retrogene
retro_pabe_1791,
Pan troglodytes ENSPTRG00000007730 ortholog_one2one 1 retrogene
retro_ptro_1404,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2514 78.71 99.82
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Download FASTA sequences of all ENSCJAG00000019912 retrocopies