Parental gene: | PSMB6, ENSEEUG00000002083 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) subunit, beta type, 6 [Source:HGNC Symbol;Acc:9543] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | scaffold_65739:3..1767(-) |
>ENSEEUG00000002083
ACCACTATTATGGCCGTGCAGTTCGACGGGGGCGTGGTTTTGGGAGCCGACTCCAGAACTACCACTGGGTCCTACATTGC
CAACCGAGTGACTGACAAGCTGACCCCCATTCATGACCGAATCTTCTGCTGCCGCTCAGGCTCGGCAGCTGATACCCAGG
CAGTAGCTGATGCAGTCACTTATCAGCTTGGCTTCCACAGCATTGAACTGAATGAGCCTCCACTGGTACACACAGCTGCC
AGCCTCTTTAAGGAGATGTGTTACCGATACCGAGAAGAGCTCATGGCAGGAATCATCATTGCAGGCTGGGACCCTCAAGA
GGGAGGACAGGTGTACTCAGTGCCCATGGGAGGTATGATGGTTAGGCAGTCCTTCGCCATTGGGGGTTCAGGGAGCTCCT
ACATCTATGGTTATGTTGATGCTACCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGCAGTTCACTGCCAACGCTCCT
GCTTTGGCCATGGAGCGGGATTCAAGTGGAGGGGTGATCCGCCTGGCAGCCATT
ACCACTATTATGGCCGTGCAGTTCGACGGGGGCGTGGTTTTGGGAGCCGACTCCAGAACTACCACTGGGTCCTACATTGC
CAACCGAGTGACTGACAAGCTGACCCCCATTCATGACCGAATCTTCTGCTGCCGCTCAGGCTCGGCAGCTGATACCCAGG
CAGTAGCTGATGCAGTCACTTATCAGCTTGGCTTCCACAGCATTGAACTGAATGAGCCTCCACTGGTACACACAGCTGCC
AGCCTCTTTAAGGAGATGTGTTACCGATACCGAGAAGAGCTCATGGCAGGAATCATCATTGCAGGCTGGGACCCTCAAGA
GGGAGGACAGGTGTACTCAGTGCCCATGGGAGGTATGATGGTTAGGCAGTCCTTCGCCATTGGGGGTTCAGGGAGCTCCT
ACATCTATGGTTATGTTGATGCTACCTACCGGGAAGGCATGACCAAGGAAGAGTGTCTGCAGTTCACTGCCAACGCTCCT
GCTTTGGCCATGGAGCGGGATTCAAGTGGAGGGGTGATCCGCCTGGCAGCCATT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 42 .93 RPM |
| SRP017611_kidney | 77 .83 RPM |
| SRP017611_brain | 35 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000005851 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010676 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000005554 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019551 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000000595 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_71 | 81.41 | 86.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_203 | 85.26 | 53.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_607 | 85.26 | 53.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000002083 retrocopies