Parental gene: | CRLS1, ENSECAG00000023869 |
| Aliases: | None |
| Description: | cardiolipin synthase 1 [Source:HGNC Symbol;Acc:16148] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 22:17322755..17344361(-) |
>ENSECAG00000023869
TATGAAAACCCATGGACAATCCCAAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTTTGGGCTATTTGATTAT
TGAAGAGGATTTTAATATTGCTCTAGGAGTTTTTGCTTTAGCTGGGCTAACTGATTTGTTGGATGGATTTATTGCTCGAA
ACTGGGCCAGTCAAAAATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTGTCTTATATGTT
AGCTTGACCTATGCAGATCTTATTCCAGTTCCACTTACTTATATGATAATTTCAAGAGATGTAATGTTGATTGCTGCTGT
TTTTTATGTCAGATATCGAACTCTTCCAACACCGCGAACACTTTCTAAGTATTTCAATCCTTGCTATGCCACTGCTAGGT
TAAAACCAACCTTCATCAGCAAGGTAAACACAGCAGTCCAGTTAATCTTGGTGGCAGCTTCTTTGGCAGCTCCGGTTTTT
AATTATGCTGACAGCATTTATCTTCAGATACTGTGGTGTTTTACAGCTTTTACCACAGCTGCATCAGCTTACAGTTATTA
TCATTATGGTCGGAAAACTGTTCAGGTGATAAAAGGCAAATGA
TATGAAAACCCATGGACAATCCCAAATATGTTGTCAATGACGAGAATTGGCTTGGCCCCAGTTTTGGGCTATTTGATTAT
TGAAGAGGATTTTAATATTGCTCTAGGAGTTTTTGCTTTAGCTGGGCTAACTGATTTGTTGGATGGATTTATTGCTCGAA
ACTGGGCCAGTCAAAAATCAGCTTTGGGAAGTGCTCTTGATCCACTTGCTGATAAAATACTTATCAGTGTCTTATATGTT
AGCTTGACCTATGCAGATCTTATTCCAGTTCCACTTACTTATATGATAATTTCAAGAGATGTAATGTTGATTGCTGCTGT
TTTTTATGTCAGATATCGAACTCTTCCAACACCGCGAACACTTTCTAAGTATTTCAATCCTTGCTATGCCACTGCTAGGT
TAAAACCAACCTTCATCAGCAAGGTAAACACAGCAGTCCAGTTAATCTTGGTGGCAGCTTCTTTGGCAGCTCCGGTTTTT
AATTATGCTGACAGCATTTATCTTCAGATACTGTGGTGTTTTACAGCTTTTACCACAGCTGCATCAGCTTACAGTTATTA
TCATTATGGTCGGAAAACTGTTCAGGTGATAAAAGGCAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 6 .09 RPM |
| SRP021940_embryo | 8 .54 RPM |
| SRP021940_cerebellum | 6 .34 RPM |
| SRP021940_testis | 23 .21 RPM |
| SRP021940_placental_villous | 7 .31 RPM |
| SRP021940_articular_cartilage | 4 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010596 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000000065 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005934 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000023647 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011666 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000006349 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000021273 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_247 | 73.65 | 72.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_930 | 69.52 | 52.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000023869 retrocopies