Parental gene:

RNF167, ENSECAG00000021567

Aliases:None
Description:ring finger protein 167 [Source:HGNC Symbol;Acc:24544]
Organism:Horse (Equus caballus)
Coordinates:11:49580192..49584488(-)


>ENSECAG00000021567
ATGCACCCTGCGGCCTTCCAGCTTCCTGTGGTTGTGGCCACTGTGCTGTGGGGAGCAGCCCCCATCCGGGGGCTCATTCG
AGCGACCTCGGACCACAATGCCAGCATGGACTTTGCAGACCTTCCAGCTCTTTTTGGGGCTGCATTGAGCCAGGAGGGAC
TTCAGGGCTTCCTTGTGGAGGCTCACCCAGCCAATGCCTGCAGCCCCATTGCCCCACCACCCCCAGCCCCGGTCAACGGG
TCAGTCTTTATTGCACTGCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGTCCTAAATGCTCAGAAGGCTGGGTATGG
TGCAGCTGTGGTACACAATGTGAATTCCAATGAACTTCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCAGATCT
GGATCCCATCTGTGTTTATTGGGGAGAGGAGCTCCGAGTACCTGCGTGCCCTCTTTGTCTATGAGAAGGGGGCTCGGGTG
CTTCTGGTCCCAGACAATAGCTTCCCCTTGGGCTATTACCTCATCCCTTTCACAGGGATTGTGGGACTGCTGGTTTTGGC
CATGGGAGCAGTGATGATAGTTCGTTGTATCCAGCACCGGAAACGGCTCCAGCGGAATCGACTGACCAAAGAGCAGCTGA
AACAGATTCCTACACATGACTATCAAAAGGGAGACCAGTATGATGTCTGTGCCATCTGCCTGGATGAATATGAGGATGGA
GACAAGCTGAGGGTGCTCCCCTGTGCTCATGCCTATCACAGCCGCTGTGTGGACCCCTGGCTCACTCAGACCCGGAAGAC
CTGCCCCATCTGCAAGCAGCCCGTTCATCGGGGTCCTGGGGACGAGGAGGAAGAAGAAACTCAGGAGCAAGAGGGTGATG
AGGCAGGGGAGCCAAGGGACCACCCTGCCTCGGAACGCACCCCACTTCTGGGCTCCAGTCCCACACTTCCCCCCTGCTTT
GGCTCCCTAGCCCCAGCCCCCCATGTTTTTCCTGGGTCTTCAGCGGATCCTCCAGCCTCTCCTTCCTCCTCTTCCTCTTC
AGTTGCC

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 50 .70 RPM
SRP021940_embryo 52 .09 RPM
SRP021940_cerebellum 69 .23 RPM
SRP021940_testis 106 .15 RPM
SRP021940_placental_villous 80 .06 RPM
SRP021940_articular_cartilage 41 .26 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006392 ortholog_one2one 1 retrogene
retro_amel_43,
Bos taurus ENSBTAG00000004913 ortholog_one2one 1 retrogene
retro_btau_217,
Canis familiaris ENSCAFG00000015830 possible_ortholog 2 retrogenes
retro_cfam_1053, retro_cfam_84,
Dipodomys ordii ENSDORG00000011757 ortholog_one2one 2 retrogenes
retro_dord_277, retro_dord_432,
Felis catus ENSFCAG00000011173 ortholog_one2one 1 retrogene
retro_fcat_99,
Mustela putorius furo ENSMPUG00000010940 ortholog_one2one 1 retrogene
retro_mputfur_95,
Pteropus vampyrus ENSPVAG00000003781 ortholog_one2one 1 retrogene
retro_pvam_1206,
Sorex araneus ENSSARG00000011216 ortholog_one2one 1 retrogene
retro_sara_517,
Sus scrofa ENSSSCG00000017906 ortholog_one2one 1 retrogene
retro_sscr_518,
Tursiops truncatus ENSTTRG00000001298 ortholog_one2one 1 retrogene
retro_ttru_1062,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_583 71.62 65.33
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Download FASTA sequences of all ENSECAG00000021567 retrocopies