Parental gene: | RNF167, ENSCAFG00000015830 |
| Aliases: | None |
| Description: | ring finger protein 167 [Source:HGNC Symbol;Acc:24544] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 5:31673155..31676441(-) |
>ENSCAFG00000015830
ATGCGCCCCGCGGCCTTCCCGCTTCCTGTGGTCGTGGCCGCCGTGCTGTGGGGAGCGTCCCCCGCGCGGGCGCTCATCAG
AGCGACCTCCGACCACAATGCCAGCATGGACTTTGCAGACCTGCCAGCTCTCTTTGGGGCTGCCCTGAGCCAGGAGGGAC
TTCAGGGCTTCCTTGTGGAGGCTCACCCAGCCAATGCCTGCAGCCCTATTGCCCCTCCACCCCCAGCCCCGGTCAATGGG
TCAGTGTTTATTGCACTGCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGTCCTGAATGCTCAGAAGGCCGGGTATGG
CGCAGCTGTGGTCCACAACGTGAACTCCAACGAGCTTCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCAGATCT
GGATCCCGTCTGTGTTTATCGGGGAGAGGAGCTCTGAGTACCTGCGTGCCCTGTTTGTCTACGAGAAGGGGGCTCGGGTG
CTTCTGGTTCCAGACAATAGCTTCCCACTGGGGTATTACCTCATCCCCTTCACAGGGATTGTGGGACTGCTCGTTCTGGC
CATGGGAGCGGTGATGGTAGTTCGTTGTATCCAGCACCGGAAGCGGCTCCAGCGGAATCGACTGTCCAAAGAGCAACTGA
AACAGATTCCTACACATGACTATCAGAAGGGTGAGAGGCGTGGGGAGAGGCAGGGCCCTTCCCACAGCTTGCCTGGTTCT
GAGGGAGTTTTGAGCTCAGGGGACCAGGGGTGA
ATGCGCCCCGCGGCCTTCCCGCTTCCTGTGGTCGTGGCCGCCGTGCTGTGGGGAGCGTCCCCCGCGCGGGCGCTCATCAG
AGCGACCTCCGACCACAATGCCAGCATGGACTTTGCAGACCTGCCAGCTCTCTTTGGGGCTGCCCTGAGCCAGGAGGGAC
TTCAGGGCTTCCTTGTGGAGGCTCACCCAGCCAATGCCTGCAGCCCTATTGCCCCTCCACCCCCAGCCCCGGTCAATGGG
TCAGTGTTTATTGCACTGCTTCGAAGATTCGACTGCAACTTTGACCTCAAGGTCCTGAATGCTCAGAAGGCCGGGTATGG
CGCAGCTGTGGTCCACAACGTGAACTCCAACGAGCTTCTGAACATGGTGTGGAATAGTGAGGAAATCCAGCAGCAGATCT
GGATCCCGTCTGTGTTTATCGGGGAGAGGAGCTCTGAGTACCTGCGTGCCCTGTTTGTCTACGAGAAGGGGGCTCGGGTG
CTTCTGGTTCCAGACAATAGCTTCCCACTGGGGTATTACCTCATCCCCTTCACAGGGATTGTGGGACTGCTCGTTCTGGC
CATGGGAGCGGTGATGGTAGTTCGTTGTATCCAGCACCGGAAGCGGCTCCAGCGGAATCGACTGTCCAAAGAGCAACTGA
AACAGATTCCTACACATGACTATCAGAAGGGTGAGAGGCGTGGGGAGAGGCAGGGCCCTTCCCACAGCTTGCCTGGTTCT
GAGGGAGTTTTGAGCTCAGGGGACCAGGGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 20 .96 RPM |
| SRP017611_kidney | 34 .87 RPM |
| SRP017611_liver | 18 .56 RPM |
| SRP012049_cerebellum | 30 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006392 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000004913 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000008370 | within_species_paralog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011757 | possible_ortholog | 2 retrogenes | |
| Equus caballus | ENSECAG00000021567 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000011173 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010940 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003781 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000011216 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000017906 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001298 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_84 | 68.86 | 89.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1053 | 52.75 | 71.60 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000015830 retrocopies