Parental gene:

CDK1, ENSECAG00000009716

Aliases:None
Description:cyclin-dependent kinase 1 [Source:HGNC Symbol;Acc:1722]
Organism:Horse (Equus caballus)
Coordinates:1:50226791..50240611(+)


>ENSECAG00000009716
ATGGAAGATTATATCAAAATAGAGAAAATTGGAGAAGGAACCTATGGAGTTGTGTATAAGGGTAGACACAAAACTACAGG
TCAAGTGGTAGCCATGAAGAAAATCAGACTAGAAAGTGAAGAGGAAGGGGTTCCTAGTACTGCAATTCGGGAAATTTCTT
TATTAAAAGAACTGCGTCATCCAAATATAGTCAGTCTTCAAGATGTGCTTATGCAGGATTCCAGGTTATATCTCATCTTT
GAGTTCCTTTCCATGGATCTCAAGAAATACCTGGATTCTATTCCTCCTGGGCAGTTCATGGATTCTTCACTTGTTAAGAG
TTATTTGTACCAAATCCTACAAGGGATTGTGTTTTGTCACTCTAGAAGAGTTCTACACAGAGACTTAAAACCTCAGAATC
TATTGATTGATGACAAAGGAACAATTAAACTGGCTGATTTTGGCCTTGCCAGAGCTTTTGGAATACCTATTAGAGTATAT
ACACATGAGGTAGTAACACTCTGGTATAGATCTCCAGAAGTATTGCTGGGGTCGGCTCGCTACTCGACTCCGGTTGACAT
TTGGAGTATAGGTACCATATTTGCAGAATTAGCAACTAAGAAACCACTTTTCCATGGAGACTCAGAAATCGATCAACTCT
TCAGAATTTTCAGAGCTTTGGGCACCCCCAATAATGAAGTGTGGCCAGAAGTGGAATCTTTGCAGGACTATAAGAATACG
TTTCCCAAGTGGAAACCAGGAAGCCTCGCATCCCATGTCAAAAACTTGGATGAAAATGGTTTGGATCTGCTCTCGAAAAT
GTTAGTCTATGATCCTGCCAAACGAATTTCTGGCAAAATGGCACTGAATCATCCATATTTTAATGATTTGGACAATCAGA
TTAAGAAGATGTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 2 .88 RPM
SRP021940_embryo 14 .68 RPM
SRP021940_cerebellum 0 .21 RPM
SRP021940_testis 10 .87 RPM
SRP021940_placental_villous 3 .95 RPM
SRP021940_articular_cartilage 0 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007001 ortholog_one2one 2 retrogenes
retro_cjac_1846, retro_cjac_671,
Cavia porcellus ENSCPOG00000005402 ortholog_one2one 3 retrogenes
retro_cpor_1414, retro_cpor_1422, retro_cpor_200,
Dasypus novemcinctus ENSDNOG00000018590 ortholog_one2one 1 retrogene
retro_dnov_265,
Felis catus ENSFCAG00000014972 ortholog_one2one 1 retrogene
retro_fcat_329,
Microcebus murinus ENSMICG00000005793 ortholog_one2many 1 retrogene
retro_mmur_43,
Monodelphis domestica ENSMODG00000017091 ortholog_one2many 1 retrogene
retro_mdom_702,
Rattus norvegicus ENSRNOG00000000632 ortholog_one2one 1 retrogene
retro_rnor_1638,
Tupaia belangeri ENSTBEG00000017549 ortholog_one2one 3 retrogenes
retro_tbel_3309, retro_tbel_807, retro_tbel_812,
Tursiops truncatus ENSTTRG00000001085 ortholog_one2one 2 retrogenes
retro_ttru_1619, retro_ttru_1634,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_637 75.46 72.05
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Download FASTA sequences of all ENSECAG00000009716 retrocopies