Parental gene:

PSMB2, ENSDNOG00000017663

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type, 2 [Source:HGNC Symbol;Acc:9539]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_4019:430031..453224(-)


>ENSDNOG00000017663
CATGACAAGATGTTTAAGATGAGTGAAAAAATCTTACTCCTATGTGTTGGAGAGGCTGGAGACACTGTGCAATTTGCAGA
ATATATTCAGAAAAATGTACAACTTTATAAGATGAGAAATGNNNNNNNNNNNNNNNNNACAGCAGCAGCTAATTTCACTC
GCCGAAACTTGGACTGCCTTCGGAGTCGGACCCCGTATCATGTCAACCTCCTCCTGGCTGGTTATGATGAGCATGAAGGT
CCAGCACTCTACTACATGGACTACCTAGCAGCCTTGGCCAAGGCCCCTTTTGCAGCCCATGGCTATGGTGCCTTCCTCAC
TCTCAGTATCCTGGACCGATACTATACACCAACTATTTCACGTGAGAGGGCAGTGGAGCTTCTTAGGAAGTGTCTTGAGG
AG

Library Parental gene expression (RPM)
SRP012922_ascending_colon 71 .18 RPM
SRP012922_cerebellum 41 .10 RPM
SRP012922_heart 48 .26 RPM
SRP012922_kidney 58 .32 RPM
SRP012922_liver 41 .95 RPM
SRP012922_lung 45 .05 RPM
SRP012922_quadricep_muscle 43 .96 RPM
SRP012922_spleen 78 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000715 ortholog_one2one 1 retrogene
retro_amel_743,
Canis familiaris ENSCAFG00000003543 ortholog_one2one 1 retrogene
retro_cfam_1291,
Callithrix jacchus ENSCJAG00000001547 ortholog_one2one 1 retrogene
retro_cjac_2110,
Equus caballus ENSECAG00000021615 ortholog_one2one 1 retrogene
retro_ecab_769,
Echinops telfairi ENSETEG00000019511 ortholog_one2one 1 retrogene
retro_etel_1529,
Felis catus ENSFCAG00000030845 ortholog_one2one 1 retrogene
retro_fcat_1803,
Macropus eugenii ENSMEUG00000000421 ortholog_one2one 1 retrogene
retro_meug_1235,
Monodelphis domestica ENSMODG00000017902 ortholog_one2many 1 retrogene
retro_mdom_79,
Mustela putorius furo ENSMPUG00000014891 ortholog_one2one 1 retrogene
retro_mputfur_1550,
Ochotona princeps ENSOPRG00000012259 ortholog_one2one 2 retrogenes
retro_opri_76, retro_opri_762,
Pteropus vampyrus ENSPVAG00000001871 ortholog_one2one 1 retrogene
retro_pvam_909,
Sorex araneus ENSSARG00000000409 ortholog_one2one 2 retrogenes
retro_sara_557, retro_sara_660,
Sarcophilus harrisii ENSSHAG00000016996 ortholog_one2one 1 retrogene
retro_shar_794,
Tupaia belangeri ENSTBEG00000005230 ortholog_one2one 1 retrogene
retro_tbel_4039,
Tarsius syrichta ENSTSYG00000005648 ortholog_one2one 2 retrogenes
retro_tsyr_403, retro_tsyr_912,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_159 77.78 99.25
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Download FASTA sequences of all ENSDNOG00000017663 retrocopies