Parental gene: | CHAC1, ENSDNOG00000017531 |
| Aliases: | None |
| Description: | ChaC, cation transport regulator homolog 1 (E. coli) [Source:HGNC Symbol;Acc:28680] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2759:22980..24375(+) |
>ENSDNOG00000017531
GACCGCCCCGCGCTGTGGATTTTCGGGTACGGCTACGTGATGGAGAGACCCGACTTCGCCTTCAGCGACAGCCAGGTAGA
CTTCGTGCGCGACTATAGCCGCCGCTTCTGGCAGAGAGACACCTTCCATCGCGGCAGCGACAAGATGCCTGGCCGTGTGG
TGACCCTCCTGGAAGATGGTGAGGGCTGCACTTGGGGCGTGGCATACCAGGTTCGAGGTGAGCAGGTGAATGAGGCCCTG
AAGTACCTGAATGTGCGCGAGGCAGTGCTCGGTGGCTATGACACCAAGGAGGTCACCTTCTGCCCCCAAGATACCCCCGA
TCAACCACTGAAGGCCTTGGCCTACGTGGCCACCCCACAGAACCCTGGTTACCTGGGCCCCGCACCCGAGGAGGCCATCG
CCACACAGATCCTGGCCTGCCGGGGCTTCTCAGGCCACAACCTGGAGTACTTGCTGCGCCTGGCGGACTTCATGCAGCTC
TGTGGGCCCCAGGCACAAGATGAGCACCTGGAGGCGATTGTTGACGCCGTGGGCACCAAGCTGCCCTGCTTCTGCCCCAC
CGAGCAGGCTCTGGCGCTGGTCTGA
GACCGCCCCGCGCTGTGGATTTTCGGGTACGGCTACGTGATGGAGAGACCCGACTTCGCCTTCAGCGACAGCCAGGTAGA
CTTCGTGCGCGACTATAGCCGCCGCTTCTGGCAGAGAGACACCTTCCATCGCGGCAGCGACAAGATGCCTGGCCGTGTGG
TGACCCTCCTGGAAGATGGTGAGGGCTGCACTTGGGGCGTGGCATACCAGGTTCGAGGTGAGCAGGTGAATGAGGCCCTG
AAGTACCTGAATGTGCGCGAGGCAGTGCTCGGTGGCTATGACACCAAGGAGGTCACCTTCTGCCCCCAAGATACCCCCGA
TCAACCACTGAAGGCCTTGGCCTACGTGGCCACCCCACAGAACCCTGGTTACCTGGGCCCCGCACCCGAGGAGGCCATCG
CCACACAGATCCTGGCCTGCCGGGGCTTCTCAGGCCACAACCTGGAGTACTTGCTGCGCCTGGCGGACTTCATGCAGCTC
TGTGGGCCCCAGGCACAAGATGAGCACCTGGAGGCGATTGTTGACGCCGTGGGCACCAAGCTGCCCTGCTTCTGCCCCAC
CGAGCAGGCTCTGGCGCTGGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 1 .36 RPM |
| SRP012922_cerebellum | 3 .57 RPM |
| SRP012922_heart | 1 .16 RPM |
| SRP012922_kidney | 1 .10 RPM |
| SRP012922_liver | 1 .55 RPM |
| SRP012922_lung | 2 .75 RPM |
| SRP012922_quadricep_muscle | 0 .17 RPM |
| SRP012922_spleen | 0 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000024541 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011476 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_438 | 62.50 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000017531 retrocopies