Parental gene: | SSR1, ENSDNOG00000015772 |
| Aliases: | None |
| Description: | signal sequence receptor, alpha [Source:HGNC Symbol;Acc:11323] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2606:8897..74992(-) |
>ENSDNOG00000015772
ATGAGACTCCTCCATCGCCTGCTCCTGCTTCTCTTGCTTGTGTCCCCAGGTCCTCTCTTGCGCAGAGACGGCTCTGGAGG
CTCATGTGTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTCCAGCAAATAACATCGTGAAGTTCTTGGTAGGCTT
TACAAACAAGGGTACAGAAGACTTTATTGTTGAATCCCTAGATGCCTCATTCCGTTATCCTCAGGACTACCAGTTTTATA
TCCAGAATTTCACAGCTCTTCCTCTGAACACTGTTGTGCCACCCCAGCGACAGGCAACTTTTGAATACTCCTTCATTCCT
GCAGAGCCCATGGGTGGTCGACCTTTTGGTCTGGTCATCAATCTGAACTACAAAGATCTGAATGGCAATGTGTTCCAAGA
TGCTGTCTTCAATCAAACAGTTACAATTATTGAAAGAGAGGATGGGTTAGATGGAGAAACAATCTTTATGTATATGTTCC
TTGCCGGTCTTGGGCTACTCGTTGTTGTTGGCCTTCATCAACTCCTAGAATCTAGAAAGCGCAAAAGAACAATACAGAAA
GTAGAAATGGGTACATCAAGTCAGAATGATGTTGATATGAGTTGGATTCCTCAGGAAACTTTGAATCAAATCAATAAAGC
TTCACCAAGAAGGTTGCCCAGGAAACGGGCGCAGAAGAGATCAGTGGGATCTGATGAGTAA
ATGAGACTCCTCCATCGCCTGCTCCTGCTTCTCTTGCTTGTGTCCCCAGGTCCTCTCTTGCGCAGAGACGGCTCTGGAGG
CTCATGTGTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTCCAGCAAATAACATCGTGAAGTTCTTGGTAGGCTT
TACAAACAAGGGTACAGAAGACTTTATTGTTGAATCCCTAGATGCCTCATTCCGTTATCCTCAGGACTACCAGTTTTATA
TCCAGAATTTCACAGCTCTTCCTCTGAACACTGTTGTGCCACCCCAGCGACAGGCAACTTTTGAATACTCCTTCATTCCT
GCAGAGCCCATGGGTGGTCGACCTTTTGGTCTGGTCATCAATCTGAACTACAAAGATCTGAATGGCAATGTGTTCCAAGA
TGCTGTCTTCAATCAAACAGTTACAATTATTGAAAGAGAGGATGGGTTAGATGGAGAAACAATCTTTATGTATATGTTCC
TTGCCGGTCTTGGGCTACTCGTTGTTGTTGGCCTTCATCAACTCCTAGAATCTAGAAAGCGCAAAAGAACAATACAGAAA
GTAGAAATGGGTACATCAAGTCAGAATGATGTTGATATGAGTTGGATTCCTCAGGAAACTTTGAATCAAATCAATAAAGC
TTCACCAAGAAGGTTGCCCAGGAAACGGGCGCAGAAGAGATCAGTGGGATCTGATGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 64 .95 RPM |
| SRP012922_cerebellum | 15 .12 RPM |
| SRP012922_heart | 14 .85 RPM |
| SRP012922_kidney | 30 .94 RPM |
| SRP012922_liver | 31 .12 RPM |
| SRP012922_lung | 34 .82 RPM |
| SRP012922_quadricep_muscle | 17 .48 RPM |
| SRP012922_spleen | 48 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000022731 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000019520 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000020111 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009083 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014234 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000022608 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_879 | 71.28 | 67.13 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015772 retrocopies