Parental gene: | ENSDNOG00000015360 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3610:3135..38207(-) |
>ENSDNOG00000015360
ATGGACAAACGGATTCATTTAGAGCTGCGGAACAGGACGCCCTCTGATGTGAAAGAGCTTGTCCTGGACAACTGTCGGTC
AAATGAAGGCAAAATCGAAGGTCTCACAGATGAATTTGAAGAACTGGAGTTCTTAAGTACAATCAATGTAGGCCTCACCT
CAGTTGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGTGATAACAGAATCTCAGGGGGCCTGGAAGTA
TTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAACTTAAGTGGCAACAAAATTAAAGACCTCAGCACAATAGAGCCACT
GAAGAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGTGAGGTAACCAACCTGAATGACTACCGAGAAAACGTGT
TTAAACTCCTTCCGCAACTCACGTATCTTGATGGCTACGACCGGGATGATAAGGAGGCCCCCGACTCGGATGCTGAGGGC
TACGTGGAGGGCCTAGATGACGAGGAGGAAGATGAGGATGAGGAAGAATATGATGAAGATGCTCAGGTAGTGGAAGATGA
GGAAGATGAAGATGAGGAGGAGGAAGGTGAAGAGGAAGATGTGAGTGGAGAAGAGGAGGAGGATGATGGTTATAACGATG
GGGAAGTAGAT
ATGGACAAACGGATTCATTTAGAGCTGCGGAACAGGACGCCCTCTGATGTGAAAGAGCTTGTCCTGGACAACTGTCGGTC
AAATGAAGGCAAAATCGAAGGTCTCACAGATGAATTTGAAGAACTGGAGTTCTTAAGTACAATCAATGTAGGCCTCACCT
CAGTTGCAAACTTACCAAAGTTAAACAAACTTAAGAAGCTTGAACTAAGTGATAACAGAATCTCAGGGGGCCTGGAAGTA
TTGGCAGAAAAGTGTCCGAACCTCACGCATCTAAACTTAAGTGGCAACAAAATTAAAGACCTCAGCACAATAGAGCCACT
GAAGAAGTTAGAAAACCTCAAGAGCTTAGACCTTTTCAATTGTGAGGTAACCAACCTGAATGACTACCGAGAAAACGTGT
TTAAACTCCTTCCGCAACTCACGTATCTTGATGGCTACGACCGGGATGATAAGGAGGCCCCCGACTCGGATGCTGAGGGC
TACGTGGAGGGCCTAGATGACGAGGAGGAAGATGAGGATGAGGAAGAATATGATGAAGATGCTCAGGTAGTGGAAGATGA
GGAAGATGAAGATGAGGAGGAGGAAGGTGAAGAGGAAGATGTGAGTGGAGAAGAGGAGGAGGATGATGGTTATAACGATG
GGGAAGTAGAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 60 .09 RPM |
| SRP012922_cerebellum | 53 .89 RPM |
| SRP012922_heart | 31 .56 RPM |
| SRP012922_kidney | 56 .40 RPM |
| SRP012922_liver | 30 .19 RPM |
| SRP012922_lung | 40 .62 RPM |
| SRP012922_quadricep_muscle | 27 .69 RPM |
| SRP012922_spleen | 56 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002339 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000015773 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000140350 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015417 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013347 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000006595 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007219 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000045651 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000010906 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016417 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_836 | 91.07 | 77.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_956 | 69.28 | 70.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1199 | 53.39 | 53.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1250 | 61.88 | 82.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1696 | 68.75 | 65.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015360 retrocopies