Parental gene:

ENSDNOG00000015309

Aliases:None
Description:None
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2615:118635..130990(+)


>ENSDNOG00000015309
ATGCCAGTGGCGGTAATGGCGGAAAGTGCCTTCAGTTTCAAAAAGTTGCTGGATCAGTGCGAGAATCAGGAGCTCGAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAATTCTGAACTTGGGGGAATTTGGTCAGTAGGACAGAGA
ATCTGGCAGAGAGATTTCCCTGGGATCTACACGATCATCAACGCCCAGTGGTCCGAGCAGCCAATCATGGAAGCAAATGC
AACAAGGAGACGAGCCTTCACCCTGGTTTCTCAAGCATATACCTCCATAATCGCGGACGACTTTGCAGCCTTTGTCGGGC
TTCCTGTAGAAGAGGCTGTGAAAGGTATTTTAGAACAAGGATGGCAAGCTGACTCCACCACGAGAATGGTTATGCCCAAA
AAGCCGGTTGCAGGAGCCCTGGATGTTTCTTTTAATAGGTTTATTCCTTTATTAGAGCCTGCCCCAGTCCCACCAATCCC
TAATGAACAGCAGTTAGCCAGATTGACCGATTATGTGGCTTTCCTCGAAAACTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 11 .28 RPM
SRP012922_cerebellum 24 .47 RPM
SRP012922_heart 9 .75 RPM
SRP012922_kidney 8 .49 RPM
SRP012922_liver 4 .80 RPM
SRP012922_lung 10 .54 RPM
SRP012922_quadricep_muscle 12 .98 RPM
SRP012922_spleen 12 .71 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005854 ortholog_one2many 3 retrogenes
retro_btau_1315, retro_btau_1401, retro_btau_1402,
Canis familiaris ENSCAFG00000030168 possible_ortholog 1 retrogene
retro_cfam_1327,
Callithrix jacchus ENSCJAG00000002267 ortholog_one2many 1 retrogene
retro_cjac_4193,
Felis catus ENSFCAG00000013789 possible_ortholog 1 retrogene
retro_fcat_1648,
Homo sapiens ENSG00000198612 ortholog_one2many 2 retrogenes
retro_hsap_2657, retro_hsap_4869,
Loxodonta africana ENSLAFG00000008617 possible_ortholog 1 retrogene
retro_lafr_928,
Macropus eugenii ENSMEUG00000008189 ortholog_many2many 3 retrogenes
retro_meug_583, retro_meug_609, retro_meug_701,
Macaca mulatta ENSMMUG00000021605 ortholog_one2many 1 retrogene
retro_mmul_2610,
Monodelphis domestica ENSMODG00000007474 ortholog_one2many 1 retrogene
retro_mdom_1295,
Mustela putorius furo ENSMPUG00000000068 possible_ortholog 1 retrogene
retro_mputfur_176,
Mus musculus ENSMUSG00000034432 ortholog_one2many 1 retrogene
retro_mmus_1812,
Nomascus leucogenys ENSNLEG00000010706 ortholog_one2many 2 retrogenes
retro_nleu_1528, retro_nleu_2002,
Oryctolagus cuniculus ENSOCUG00000007341 ortholog_one2many 4 retrogenes
retro_ocun_1549, retro_ocun_1579, retro_ocun_428, retro_ocun_550,
Pongo abelii ENSPPYG00000013308 ortholog_many2many 1 retrogene
retro_pabe_3787,
Rattus norvegicus ENSRNOG00000019635 ortholog_one2many 3 retrogenes
retro_rnor_1005, retro_rnor_1078, retro_rnor_975,
Ictidomys tridecemlineatus ENSSTOG00000022662 ortholog_one2many 4 retrogenes
retro_itri_1065, retro_itri_1383, retro_itri_1737, retro_itri_296,
Tupaia belangeri ENSTBEG00000015944 ortholog_one2many 1 retrogene
retro_tbel_4315,
Tarsius syrichta ENSTSYG00000002196 ortholog_one2many 7 retrogenes
retro_tsyr_1053, retro_tsyr_1559, retro_tsyr_165, retro_tsyr_1695, retro_tsyr_1874, retro_tsyr_448, retro_tsyr_943,
Tursiops truncatus ENSTTRG00000013614 ortholog_one2many 1 retrogene
retro_ttru_1448,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_149 82.69 50.98
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2. retro_dnov_527 75.54 65.69
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3. retro_dnov_1157 78.70 51.47
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4. retro_dnov_1306 84.62 67.65
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5. retro_dnov_1701 87.74 50.49
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Download FASTA sequences of all ENSDNOG00000015309 retrocopies