Parental gene: | TRIP13, ENSDNOG00000015202 |
| Aliases: | None |
| Description: | thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:12307] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_224:41281..99426(+) |
>ENSDNOG00000015202
ATGGACGAGGTCCTGGGCGACCTGAAGCAGGCGCTGCCCTGCCTGACCGAGTCGCTGTCCATCCAAAAAGAGGTGCATCA
GCTCAGCNNNNNCACCGCGAAAAGAGAAGATATAAAGCTGAGCGTTAGGAAGCTGCTAAACAGACACAACATTGTGTTTG
GTGATTACACATGGACTGAGTTTGACGATCATTTTCTGGCCAGAAATGTGCAATCTGTGTCTATTGTTGACACAGAGTTA
AAAGTTAAAGACCCACAGCCCATTGATTTGAGCACATGTTCTCTCGCACTTCACATCTTCCAACTCAACGAGGATGGCCC
CAGCAGTGAAAACTTGGAGGAAGAGACAGAAAATATCATTGCGGCAAATCACTGGGTTCTGCCTGCAGCTGACTTCCATG
GTCTTTGGGACAGCCTGGTGTATGATGTGGAGGTTAAATCACACCTCCTCGATTACGTGACGACAACCTTACTGTTTTCA
GACAGAAACGTTGACAGCAACTTGATAAGCTGGAACCGCGTTGTGTTGCTGCACGGTCCACCAGGAACTGGAAAAACATC
CCTGTGTAAAGCATTGGCCCAGAAACTGACCATTAGACTGTCAAGCAGGTACCGATATGGCCAGCTAATTGAAATAAACA
GTCACAGCCTCTTTTCTAAGTGGTTTTCCGAAAGCGGCAAGCTGGTGACTAAGATGTTCCAGAAGATCCAGGACTCGATT
GAAGACAAAGACGCTCTGGTGTTTGTGCTGATCGACGAGGTGGAAAGCCTCACGGCAGCCCGCAACGCCTGCCGGGCGGG
CACGGAGCCCTCGGACGCCATCCGCGTGGTCAATGCCGTCCTGACCCAGATCGACCAGGTTAAAAGACACTCGAACGTGG
TGATACTTACCACGTCCAACATCACTGAGAGGATCGACGTGGCCTTCGTGGACAGAGCCGACATCAAGCAGTACATAGGC
CCCCCCTCGGCGGCAGCTATCTTCAAAATCTATCTCTCCTGTCTGGAAGAACTAATGAAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGAAGAGCGAGGGCCTCAGCGGGCGGGTCCTGCGGAAGCTGCCGTTCCTCGCGCATGCGCTCTTCGTG
CAGGCGCCGTCCGTCACCATCGAGGGCTTCCTGCGGGCGCTGGCCCTGGCCGTGGACCGGCAGTTCGAGGAGAGGAGGAA
GCTCGCGCCCTGCCCCTGA
ATGGACGAGGTCCTGGGCGACCTGAAGCAGGCGCTGCCCTGCCTGACCGAGTCGCTGTCCATCCAAAAAGAGGTGCATCA
GCTCAGCNNNNNCACCGCGAAAAGAGAAGATATAAAGCTGAGCGTTAGGAAGCTGCTAAACAGACACAACATTGTGTTTG
GTGATTACACATGGACTGAGTTTGACGATCATTTTCTGGCCAGAAATGTGCAATCTGTGTCTATTGTTGACACAGAGTTA
AAAGTTAAAGACCCACAGCCCATTGATTTGAGCACATGTTCTCTCGCACTTCACATCTTCCAACTCAACGAGGATGGCCC
CAGCAGTGAAAACTTGGAGGAAGAGACAGAAAATATCATTGCGGCAAATCACTGGGTTCTGCCTGCAGCTGACTTCCATG
GTCTTTGGGACAGCCTGGTGTATGATGTGGAGGTTAAATCACACCTCCTCGATTACGTGACGACAACCTTACTGTTTTCA
GACAGAAACGTTGACAGCAACTTGATAAGCTGGAACCGCGTTGTGTTGCTGCACGGTCCACCAGGAACTGGAAAAACATC
CCTGTGTAAAGCATTGGCCCAGAAACTGACCATTAGACTGTCAAGCAGGTACCGATATGGCCAGCTAATTGAAATAAACA
GTCACAGCCTCTTTTCTAAGTGGTTTTCCGAAAGCGGCAAGCTGGTGACTAAGATGTTCCAGAAGATCCAGGACTCGATT
GAAGACAAAGACGCTCTGGTGTTTGTGCTGATCGACGAGGTGGAAAGCCTCACGGCAGCCCGCAACGCCTGCCGGGCGGG
CACGGAGCCCTCGGACGCCATCCGCGTGGTCAATGCCGTCCTGACCCAGATCGACCAGGTTAAAAGACACTCGAACGTGG
TGATACTTACCACGTCCAACATCACTGAGAGGATCGACGTGGCCTTCGTGGACAGAGCCGACATCAAGCAGTACATAGGC
CCCCCCTCGGCGGCAGCTATCTTCAAAATCTATCTCTCCTGTCTGGAAGAACTAATGAAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGAAGAGCGAGGGCCTCAGCGGGCGGGTCCTGCGGAAGCTGCCGTTCCTCGCGCATGCGCTCTTCGTG
CAGGCGCCGTCCGTCACCATCGAGGGCTTCCTGCGGGCGCTGGCCCTGGCCGTGGACCGGCAGTTCGAGGAGAGGAGGAA
GCTCGCGCCCTGCCCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 12 .83 RPM |
| SRP012922_cerebellum | 1 .79 RPM |
| SRP012922_heart | 0 .46 RPM |
| SRP012922_kidney | 1 .64 RPM |
| SRP012922_liver | 2 .01 RPM |
| SRP012922_lung | 8 .71 RPM |
| SRP012922_quadricep_muscle | 2 .25 RPM |
| SRP012922_spleen | 20 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007439 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000003849 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006144 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015309 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2464 | 89.35 | 66.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015202 retrocopies