Parental gene: | TRIP13, ENSCJAG00000003849 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:203502964..203567679(-) |
>ENSCJAG00000003849
ATGGACGAGGCCGTGGGCGACCTGAAGCAGGCGCTTCCCTGTGAGGCGGAGTCGCCGACGGTCCACGTGGAGGTGCATCA
GCGCGGCGGCAGCACTGCAAAAAAAGAAGACATAAAGCTGAGTGTTAGAAAGCTACTCAGCAGACACAATATTGTGTTTG
GTGACTACACGTGGGCTGAGTTTGATGAGCCTTTTTTGACCAGAAATGTGCAGTCTGTGTCTATCGTTGACACAGAATTA
AAGGTTAAAGACTCACAGCCTATTGATTTGAGCACCTGCAAGGTTGTGCTTCACATCTTCCAGCTGAATGAAGATGGCCC
CAGCAGCGAAAATCTGGAGGAAGAGACAGAAAACATAATTGCAGCAAATCACTGGGTTCTGCCTGCAGCTGAATTCCACG
GGCTATGGGACAGCTTGGTGTACGACGTGGAAGTCAAATCCCATCTGCTTGATTACGTGATGACGACGTTACTGTTCTCA
GACAAGAAGGTCAACAGCAACCTCATCACCTGGAACCGGGTGGTGCTGCTCCACGGTCCTCCTGGCACTGGAAAAACATC
CCTGTGTAAAGCGTTAGCCCAGAAATTGACCATTAGACTTTCAAACAGGTACCAGTATGGCCAATTAATTGAAATAAACA
GCCACAGCCTCTTTTCTAAGTGGTTTTCAGAAAGCGGGAAGCTGGTAAACAAGATGTTTCAGAAGATTCAGGATTTGATT
GATGATAAAGACGCTCTGGTCTTTGTGCTGATTGATGAGGTGGAGAGTCTCACAGCCGCCCGAAACGCTTGCAGGGCGGG
CACCGAGCCGTCAGATGCCATCCGCGTGGTCAATGCCGTCTTAACCCAGATTGATCAGATTAAAAGGCATTCCAACGTGG
TGATTCTGACCACCTCCAACATCACCGAGAAGATCGACGTGGCGTTCGTGGACAGGGCTGACATCAAGCAGTACATCGGG
CTGCCCTCTGCGGCGGCCATCTTCAAAATCTACCTCTCTTGTTTGGAAGAACTGATGAAGTGTCAGATCATATACCCTCG
CCAGCAGCTGCTGACGCTCCGAGAGCTGGAGATGATCGGCTTCATCGAGAACAACGTGTCAGCATTGAGCCTTCTGCTGA
GTGAGATTTCAAGGAAGAGCGAAGGCCTCAGTGGCCGGGTCCTGAGAAAACTCCCCTTTCTGGCTCATGCGCTATACATC
CAGGCCCCCACCGTCACCATCGAGGGGTTCCTCCAGGCCCTGTCTCTGGCAGTGGACAAGCAGTTTGAAGAGAGAAAGAA
GCTCGAGGCTCACGTGTAA
ATGGACGAGGCCGTGGGCGACCTGAAGCAGGCGCTTCCCTGTGAGGCGGAGTCGCCGACGGTCCACGTGGAGGTGCATCA
GCGCGGCGGCAGCACTGCAAAAAAAGAAGACATAAAGCTGAGTGTTAGAAAGCTACTCAGCAGACACAATATTGTGTTTG
GTGACTACACGTGGGCTGAGTTTGATGAGCCTTTTTTGACCAGAAATGTGCAGTCTGTGTCTATCGTTGACACAGAATTA
AAGGTTAAAGACTCACAGCCTATTGATTTGAGCACCTGCAAGGTTGTGCTTCACATCTTCCAGCTGAATGAAGATGGCCC
CAGCAGCGAAAATCTGGAGGAAGAGACAGAAAACATAATTGCAGCAAATCACTGGGTTCTGCCTGCAGCTGAATTCCACG
GGCTATGGGACAGCTTGGTGTACGACGTGGAAGTCAAATCCCATCTGCTTGATTACGTGATGACGACGTTACTGTTCTCA
GACAAGAAGGTCAACAGCAACCTCATCACCTGGAACCGGGTGGTGCTGCTCCACGGTCCTCCTGGCACTGGAAAAACATC
CCTGTGTAAAGCGTTAGCCCAGAAATTGACCATTAGACTTTCAAACAGGTACCAGTATGGCCAATTAATTGAAATAAACA
GCCACAGCCTCTTTTCTAAGTGGTTTTCAGAAAGCGGGAAGCTGGTAAACAAGATGTTTCAGAAGATTCAGGATTTGATT
GATGATAAAGACGCTCTGGTCTTTGTGCTGATTGATGAGGTGGAGAGTCTCACAGCCGCCCGAAACGCTTGCAGGGCGGG
CACCGAGCCGTCAGATGCCATCCGCGTGGTCAATGCCGTCTTAACCCAGATTGATCAGATTAAAAGGCATTCCAACGTGG
TGATTCTGACCACCTCCAACATCACCGAGAAGATCGACGTGGCGTTCGTGGACAGGGCTGACATCAAGCAGTACATCGGG
CTGCCCTCTGCGGCGGCCATCTTCAAAATCTACCTCTCTTGTTTGGAAGAACTGATGAAGTGTCAGATCATATACCCTCG
CCAGCAGCTGCTGACGCTCCGAGAGCTGGAGATGATCGGCTTCATCGAGAACAACGTGTCAGCATTGAGCCTTCTGCTGA
GTGAGATTTCAAGGAAGAGCGAAGGCCTCAGTGGCCGGGTCCTGAGAAAACTCCCCTTTCTGGCTCATGCGCTATACATC
CAGGCCCCCACCGTCACCATCGAGGGGTTCCTCCAGGCCCTGTCTCTGGCAGTGGACAAGCAGTTTGAAGAGAGAAAGAA
GCTCGAGGCTCACGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .67 RPM |
| SRP051959_skeletal_muscle | 0 .07 RPM |
| SRP051959_lymph_node | 0 .71 RPM |
| SRP051959_lung | 0 .34 RPM |
| SRP051959_liver | 0 .15 RPM |
| SRP051959_kidney | 0 .20 RPM |
| SRP051959_heart | 0 .14 RPM |
| SRP051959_colon | 1 .73 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007439 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000015202 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006144 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015309 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1987 | 75.34 | 50.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000003849 retrocopies