Parental gene: | TDP2, ENSDNOG00000010113 |
| Aliases: | None |
| Description: | tyrosyl-DNA phosphodiesterase 2 [Source:HGNC Symbol;Acc:17768] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1842:86758..97128(-) |
>ENSDNOG00000010113
ATGGAGCCGGCCGGCGACCCAGAGGCCGGAGCCGAGGCGGCGCGAGACGACGGGGAGCCCCGGGTGAAGAAGCGGCGACT
CTTGTGTGCGGAGTTTGCCTCGGTCGCGAATTGCGACCCGGCCGTGGCCCAGTGCTTCCTGGCCGAGAACGACTGGGAGA
TGGAAAGAGCGCTGAACTCCTACTTTGAGCCATGCGTGGAGGAGAGCCCCCCGGAGAGCCGGCCTCGGACCCCCTGCCGG
CCCGAGGCCTATGTTGACGTAAGCAATGAAGATACAACTGATTCCACTTGTTCTAAAATCACCTCATCTGAAAATATTCA
ACAAGAAGATGGCAGTATGTTCTCTTTAATTACCTGGAATATTGATGGATTGGATCTAAACAACCTGCAAGAGAGGGCTC
GAGGGGTGTGTTCTTACTTAACTTTGTACAGTCCAGATGTGATATGTCTACAGGAAGTTATTCCTCCGTACTATAGTTAC
CTAAAGAAGAGAGCAAGTAATTACGAGATTATTACAGGTCGTGAAGAAGGATATTTCACAGCTATAATGTTGAAGAAATC
AAGAGTGAAATTAAAAAGCCAAGAGATTATTCCTTTTCCAAGTACCAAAATGATGAGAAACCTATTGTGTGTGCATGTGA
GTGTGTCAGGAAATGAACTTTACCTTATGACTTCCCATTTGGAGAGCACCAGAGGACATGCTAAGGAACGAATCAATCAG
TTAAAAGTGGTTTTAAAGAAAATGCAAGAGGCTCCAGAGACAGCTACGGTTATATTTGCAGGAGATACGAATTTAAGGGA
TCAAGAAGTTACCAGATGTGGTGGTTTGCCCAACAACATTTTGGATGTCTGGGAGTTTTTGGGCAAGCCTGAGCATTGCC
AGTTTACATGGGATACGCAAATGAACTCTAACCTTGGAATACCTGCTACTTGTAAGCTTCGTTTTGATCGAATCTTTTTC
AGAGCAGCAGCAGAAGAGGGCCATATCATTCCCCGAAGTATGGACCTTCTTGGGTTGGAAAAACTGGACTGTGGCAGATT
TCCTAGTGATCACTGGGGTCTTTTGTGCAGCTTAGATATAATATTATAA
ATGGAGCCGGCCGGCGACCCAGAGGCCGGAGCCGAGGCGGCGCGAGACGACGGGGAGCCCCGGGTGAAGAAGCGGCGACT
CTTGTGTGCGGAGTTTGCCTCGGTCGCGAATTGCGACCCGGCCGTGGCCCAGTGCTTCCTGGCCGAGAACGACTGGGAGA
TGGAAAGAGCGCTGAACTCCTACTTTGAGCCATGCGTGGAGGAGAGCCCCCCGGAGAGCCGGCCTCGGACCCCCTGCCGG
CCCGAGGCCTATGTTGACGTAAGCAATGAAGATACAACTGATTCCACTTGTTCTAAAATCACCTCATCTGAAAATATTCA
ACAAGAAGATGGCAGTATGTTCTCTTTAATTACCTGGAATATTGATGGATTGGATCTAAACAACCTGCAAGAGAGGGCTC
GAGGGGTGTGTTCTTACTTAACTTTGTACAGTCCAGATGTGATATGTCTACAGGAAGTTATTCCTCCGTACTATAGTTAC
CTAAAGAAGAGAGCAAGTAATTACGAGATTATTACAGGTCGTGAAGAAGGATATTTCACAGCTATAATGTTGAAGAAATC
AAGAGTGAAATTAAAAAGCCAAGAGATTATTCCTTTTCCAAGTACCAAAATGATGAGAAACCTATTGTGTGTGCATGTGA
GTGTGTCAGGAAATGAACTTTACCTTATGACTTCCCATTTGGAGAGCACCAGAGGACATGCTAAGGAACGAATCAATCAG
TTAAAAGTGGTTTTAAAGAAAATGCAAGAGGCTCCAGAGACAGCTACGGTTATATTTGCAGGAGATACGAATTTAAGGGA
TCAAGAAGTTACCAGATGTGGTGGTTTGCCCAACAACATTTTGGATGTCTGGGAGTTTTTGGGCAAGCCTGAGCATTGCC
AGTTTACATGGGATACGCAAATGAACTCTAACCTTGGAATACCTGCTACTTGTAAGCTTCGTTTTGATCGAATCTTTTTC
AGAGCAGCAGCAGAAGAGGGCCATATCATTCCCCGAAGTATGGACCTTCTTGGGTTGGAAAAACTGGACTGTGGCAGATT
TCCTAGTGATCACTGGGGTCTTTTGTGCAGCTTAGATATAATATTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 19 .06 RPM |
| SRP012922_cerebellum | 14 .71 RPM |
| SRP012922_heart | 5 .34 RPM |
| SRP012922_kidney | 22 .18 RPM |
| SRP012922_liver | 11 .30 RPM |
| SRP012922_lung | 19 .55 RPM |
| SRP012922_quadricep_muscle | 14 .02 RPM |
| SRP012922_spleen | 15 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012012 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006074 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000016299 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_500 | 94.36 | 93.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000010113 retrocopies