Parental gene: | ZCRB1, ENSDNOG00000010107 |
| Aliases: | None |
| Description: | zinc finger CCHC-type and RNA binding motif 1 [Source:HGNC Symbol;Acc:29620] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3540:25496..79640(-) |
>ENSDNOG00000010107
ATGAGTGGTGGATTGGCTCCAAGTAAAAGTACAGTGTATGTATCCAACTTGCCCTTTTCCCTAACAAACAATGACTTATA
TCGGATATTTTCCAAGTATGGCAAAGTTGTAAAGGTTACTATAATGAAAGATAAAGATACCAGGAAGAGTAAAGGGGTTG
CATTTATTTTATTTTTGGATAAAGAATCTGCTCAAAACTGTACAAGAGCAATAAACAACAAACAGTTATTTGGTAGAGTA
ATAAAAGCAAGCATTGCTATTGACAATGGAAGAGCAGCCGAGTTCATCCGAAGGCGAAACTACTTTGATAAATCTAAGTG
TTATGAATGTGGGAGTGGGCACTTAAGTTATGCCTGTCCTAAAAATATGCTGGGAGGACGTGAACCTCCAAAGAAGAAAG
AGAAAAAGGAAAAAAAGAAAATTCCTGAACCAGAAGAAGAAATTGAGGAAGTAGAAGAAAGTGAAGATGAAGGGGAAGAT
CCTGCTCTTGACAGTCTCGGTCAGGCCATAGCTTTCCAGCAAGCCAAAACTGAAGAACACAAAAGATGGAAACCCAGTTC
AGGGGACCCCTCAACCTCAGATGATTCAAGACGCCCAAGGATAAAGAAAAGCACATATTTCAGTGACGAAGAAGAACTTA
GTGATTAA
ATGAGTGGTGGATTGGCTCCAAGTAAAAGTACAGTGTATGTATCCAACTTGCCCTTTTCCCTAACAAACAATGACTTATA
TCGGATATTTTCCAAGTATGGCAAAGTTGTAAAGGTTACTATAATGAAAGATAAAGATACCAGGAAGAGTAAAGGGGTTG
CATTTATTTTATTTTTGGATAAAGAATCTGCTCAAAACTGTACAAGAGCAATAAACAACAAACAGTTATTTGGTAGAGTA
ATAAAAGCAAGCATTGCTATTGACAATGGAAGAGCAGCCGAGTTCATCCGAAGGCGAAACTACTTTGATAAATCTAAGTG
TTATGAATGTGGGAGTGGGCACTTAAGTTATGCCTGTCCTAAAAATATGCTGGGAGGACGTGAACCTCCAAAGAAGAAAG
AGAAAAAGGAAAAAAAGAAAATTCCTGAACCAGAAGAAGAAATTGAGGAAGTAGAAGAAAGTGAAGATGAAGGGGAAGAT
CCTGCTCTTGACAGTCTCGGTCAGGCCATAGCTTTCCAGCAAGCCAAAACTGAAGAACACAAAAGATGGAAACCCAGTTC
AGGGGACCCCTCAACCTCAGATGATTCAAGACGCCCAAGGATAAAGAAAAGCACATATTTCAGTGACGAAGAAGAACTTA
GTGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 9 .14 RPM |
| SRP012922_cerebellum | 14 .57 RPM |
| SRP012922_heart | 9 .75 RPM |
| SRP012922_kidney | 12 .59 RPM |
| SRP012922_liver | 5 .26 RPM |
| SRP012922_lung | 14 .51 RPM |
| SRP012922_quadricep_muscle | 12 .81 RPM |
| SRP012922_spleen | 13 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019119 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000004490 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000017749 | ortholog_one2one | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000014554 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000012174 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000000397 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019302 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015647 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008847 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000017422 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000001332 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000008893 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000022635 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013664 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013178 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000011095 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000011749 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000004838 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000006651 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_888 | 94.66 | 60.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1075 | 51.27 | 71.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1120 | 80.48 | 96.74 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1127 | 86.64 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1357 | 87.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_1599 | 95.00 | 55.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_1673 | 93.08 | 60.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_dnov_1846 | 95.83 | 55.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_dnov_2146 | 88.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_dnov_2432 | 87.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_dnov_2466 | 87.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000010107 retrocopies