Parental gene: | ENSDNOG00000002575 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_58172:4083..9561(-) |
>ENSDNOG00000002575
TGCAACAAACAGCTTCCTCCTTGTAACCTGAATGAAGAGGACCTGTTACAGAACCCATACTTCAGCAAGCTGCTGCTGAG
TCTCTTACAGCATGTGGACGAGAGTGGCTTAAGCCTCACCTTGGCAAAGGAGCAGGCTCAGGTCTGGAAGGAAGTTCGAC
TGCATAAAACAGTATGGTTGAGGTCTGAGATTTTACAGAGGGTCATCCAGGAGCTGCTTGTGGACTACTATGTGAAGACA
CAAGATACAGATTTAACTTCTGAGGATAAAAAGTTTCATGAGACCCTTGAACAACGGCTACTTGTGACTGAACTGACGCG
GCTCGTAGGCCCCAGCCAGGAGAGAGAGATGCCTCCACTGCTTAGGCTCCAGAAAGCAGATCTGCTGGAGCTCATGCCAC
CCTCAGAGGATTTTGTGTGGATGAGAGCTCGGCTTCAGCTAGAAGTAGAGGAACAGCTCAAGAAGAAGTGTTTCACTCTG
CTCTGCTACCATGATCCCAATTCAGATTCAGACAATGAAATCCTGAAAGCTGCAAAGGTATGGAAATTGGCAGAGATCCT
GGTGGGTGAGAAGCAACAGTGTCAAGACACTAAGAACCAGCAGAAGGAGCAGATGGTGCTGCTGGAGAAACAGAGTGCCA
CCTACTCCCAGGTGCTTCTCCGATGCCTTGCATTGCTGCAGAGGCTTCTTCAGGAGCACCGGCTGAAGACTCAGTCTGAG
CTAGACCATATCAATGCCCAGTACCTGGAGATCAAGTGTAGTGCTATGATCCTTAAGCTGAGGATGGAGGAACTAAAGAT
TTTGTCTGATACTTACACTGCTGAGAAAGTGGAAGTTCATCGTCTCATTAGGGACCGTTTGGAGGGGGCCATTCGCCTGC
AAGAACAGGACATGGAGAAGTCCCGACAGGTCCTAAACACTTATGAGGTCCTCGGGGAGGAGTTTGACAGACTGGTAAAA
GAGTATACCCAGCTCAAACAGGCAACCGAGAACAAGCGCTGGGCCCTCCAGGAGTTCAACAAGGCCTACCACTGA
TGCAACAAACAGCTTCCTCCTTGTAACCTGAATGAAGAGGACCTGTTACAGAACCCATACTTCAGCAAGCTGCTGCTGAG
TCTCTTACAGCATGTGGACGAGAGTGGCTTAAGCCTCACCTTGGCAAAGGAGCAGGCTCAGGTCTGGAAGGAAGTTCGAC
TGCATAAAACAGTATGGTTGAGGTCTGAGATTTTACAGAGGGTCATCCAGGAGCTGCTTGTGGACTACTATGTGAAGACA
CAAGATACAGATTTAACTTCTGAGGATAAAAAGTTTCATGAGACCCTTGAACAACGGCTACTTGTGACTGAACTGACGCG
GCTCGTAGGCCCCAGCCAGGAGAGAGAGATGCCTCCACTGCTTAGGCTCCAGAAAGCAGATCTGCTGGAGCTCATGCCAC
CCTCAGAGGATTTTGTGTGGATGAGAGCTCGGCTTCAGCTAGAAGTAGAGGAACAGCTCAAGAAGAAGTGTTTCACTCTG
CTCTGCTACCATGATCCCAATTCAGATTCAGACAATGAAATCCTGAAAGCTGCAAAGGTATGGAAATTGGCAGAGATCCT
GGTGGGTGAGAAGCAACAGTGTCAAGACACTAAGAACCAGCAGAAGGAGCAGATGGTGCTGCTGGAGAAACAGAGTGCCA
CCTACTCCCAGGTGCTTCTCCGATGCCTTGCATTGCTGCAGAGGCTTCTTCAGGAGCACCGGCTGAAGACTCAGTCTGAG
CTAGACCATATCAATGCCCAGTACCTGGAGATCAAGTGTAGTGCTATGATCCTTAAGCTGAGGATGGAGGAACTAAAGAT
TTTGTCTGATACTTACACTGCTGAGAAAGTGGAAGTTCATCGTCTCATTAGGGACCGTTTGGAGGGGGCCATTCGCCTGC
AAGAACAGGACATGGAGAAGTCCCGACAGGTCCTAAACACTTATGAGGTCCTCGGGGAGGAGTTTGACAGACTGGTAAAA
GAGTATACCCAGCTCAAACAGGCAACCGAGAACAAGCGCTGGGCCCTCCAGGAGTTCAACAAGGCCTACCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 12 .45 RPM |
| SRP012922_cerebellum | 7 .15 RPM |
| SRP012922_heart | 5 .57 RPM |
| SRP012922_kidney | 8 .49 RPM |
| SRP012922_liver | 5 .57 RPM |
| SRP012922_lung | 10 .54 RPM |
| SRP012922_quadricep_muscle | 5 .71 RPM |
| SRP012922_spleen | 24 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000008389 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000092036 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007504 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012934 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000586 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005651 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000006153 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_712 | 73.99 | 50.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000002575 retrocopies