Parental gene:

KIAA1191, ENSCPOG00000019402

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_17:22068645..22083986(-)


>ENSCPOG00000019402
ATGGCTTCAAGACAACCAGAAGTGCCTGCTCTTGGGCCCAGTGGGCCTCTAGGCAAGATGTCCCTGCCCATCGGGATGTG
CCGCCGGGCATTCAGCTATGATGATGCCCTGCAGGACCCTGCGCCCATGACTCCTCCTCCTGCGGACATGGGTAGCATCC
CCTGGAAGCCAGTGATTCCAGTGCGCAAGTATCAGCACCTTGCCAAGGCGGAAGAAGAGGAGACCAGTGTGTCCCCCACT
GCCATGACCCTGGCCACGGCCACTGACAGCACGGACAAGGTCCCGGTGGTGAAGGCCAAAGCTACCCATGTCCTCATGAG
TTCTCTGATCACAAAACAGACCCAGGAGAGCATTCACCGTTTCGAACAACAGGCAGGGCTGAGAGATGCTGGCTACACAC
CGCACAAGGGCCTCACCACTGAGGAAAGCAAGTACCTTCGAGTGGCAGAAGCACTCCATAAACTAAAGCTGCAGAGTGGA
GAGATGACAAAAGAAGAGAAGCAGCCTGCATCAGGCCAGTCCAGCCCGAGCAGCACCCCTCACTCTTCCCCCAAGCAGAA
GTCCAGAGGCTGGTTCACCTCTGGTTCCTCCACAGCCTTAACTGGCCCACCGCCTAGCGCTATGGATCCTGGAAGTGGGG
ACAAAGATAAAACCTCATTAGATAAGTGGAATGTGTTTGCACCAAGACACCTGCAGAAGTCTGACTCTGGAGGTTTTGCT
GTCCAGGCCTACAAAGGAGCCCAGAAGCCCTCTCCCATGGAGCTGATCCGGGCCCAGGCCACCCGAATGGCTGAAGATCC
AGCAGCCTTCAAGCCGCCCAAGATGGATATCCCTGTGACAGAAATGAAGAAACCACCACCGCGGACCCACAATCTCAAAC
CGCGTGACTTGAATGTGCTCACCCCCACTGGGTTCTAG

Library Parental gene expression (RPM)
SRP017611_liver 29 .08 RPM
SRP017611_kidney 55 .38 RPM
SRP017611_brain 47 .74 RPM
SRP040447_lung 30 .85 RPM
SRP040447_skeletal_muscle 27 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006123 ortholog_one2one 4 retrogenes
retro_chof_1411, retro_chof_1751, retro_chof_2197, retro_chof_959,
Callithrix jacchus ENSCJAG00000012337 ortholog_one2one 2 retrogenes
retro_cjac_1699, retro_cjac_901,
Dasypus novemcinctus ENSDNOG00000002676 ortholog_one2one 3 retrogenes
retro_dnov_2220, retro_dnov_753, retro_dnov_976,
Equus caballus ENSECAG00000003238 ortholog_one2one 1 retrogene
retro_ecab_621,
Felis catus ENSFCAG00000007189 ortholog_one2one 1 retrogene
retro_fcat_1625,
Homo sapiens ENSG00000122203 ortholog_one2one 4 retrogenes
retro_hsap_1641, retro_hsap_3089, retro_hsap_524, retro_hsap_817,
Gorilla gorilla ENSGGOG00000023834 ortholog_one2one 4 retrogenes
retro_ggor_1240, retro_ggor_2122, retro_ggor_482, retro_ggor_669,
Loxodonta africana ENSLAFG00000028878 ortholog_one2one 1 retrogene
retro_lafr_313,
Myotis lucifugus ENSMLUG00000003498 ortholog_one2many 1 retrogene
retro_mluc_667,
Macaca mulatta ENSMMUG00000003921 ortholog_one2many 3 retrogenes
retro_mmul_1082, retro_mmul_1566, retro_mmul_1971,
Monodelphis domestica ENSMODG00000005274 ortholog_one2many 6 retrogenes
retro_mdom_116, retro_mdom_1992, retro_mdom_218, retro_mdom_56, retro_mdom_722, retro_mdom_751,
Mustela putorius furo ENSMPUG00000012579 ortholog_one2one 1 retrogene
retro_mputfur_1237,
Mus musculus ENSMUSG00000025871 ortholog_one2one 2 retrogenes
retro_mmus_1580, retro_mmus_737,
Nomascus leucogenys ENSNLEG00000012473 ortholog_one2one 4 retrogenes
retro_nleu_1327, retro_nleu_2233, retro_nleu_251, retro_nleu_2578,
Oryctolagus cuniculus ENSOCUG00000012191 ortholog_one2one 3 retrogenes
retro_ocun_1263, retro_ocun_1415, retro_ocun_1509,
Otolemur garnettii ENSOGAG00000008281 ortholog_one2many 6 retrogenes
retro_ogar_1543, retro_ogar_1986, retro_ogar_2289, retro_ogar_3002, retro_ogar_3075, retro_ogar_781,
Procavia capensis ENSPCAG00000008839 ortholog_one2one 1 retrogene
retro_pcap_277,
Pongo abelii ENSPPYG00000016068 ortholog_one2one 4 retrogenes
retro_pabe_223, retro_pabe_2558, retro_pabe_2615, retro_pabe_729,
Pan troglodytes ENSPTRG00000017558 ortholog_one2one 5 retrogenes
retro_ptro_1111, retro_ptro_2086, retro_ptro_2975, retro_ptro_392, retro_ptro_568,
Pteropus vampyrus ENSPVAG00000012448 ortholog_one2one 1 retrogene
retro_pvam_118,
Rattus norvegicus ENSRNOG00000017133 ortholog_one2one 2 retrogenes
retro_rnor_968, retro_rnor_969,
Ictidomys tridecemlineatus ENSSTOG00000000946 ortholog_one2one 2 retrogenes
retro_itri_1163, retro_itri_960,
Tupaia belangeri ENSTBEG00000013189 ortholog_one2one 1 retrogene
retro_tbel_2271,
Tursiops truncatus ENSTTRG00000005376 ortholog_one2one 1 retrogene
retro_ttru_383,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_625 69.41 82.30
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Download FASTA sequences of all ENSCPOG00000019402 retrocopies