Parental gene:

MCTS1, ENSCPOG00000005502

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_69:613151..622440(+)


>ENSCPOG00000005502
ATGTTCAAGAAATTTGATGAAAAAGAAAATGTGTCCAACTGCATCCAGTTGAAAACCTCAGTTATTAAGGGTATTAAGAA
TCAATTGATAGAGCAATTTCCAGGTATTGAACCATGGCTTAATCAAATCATGCCTAAGAAAGATCCTGTCAAAATAGTCC
GATGCCATGAACATATAGAAATCCTTACAGTAAATGGAGAATTACTATTTTTTAGACAAAGAGAAGGGCCTTTTTATCCA
ACTCTAAGGTTACTTCACAAATATCCTTTTATCCTGCCACATCAGCAGGTTGATAAAGGAGCCATCAAATTTGTACTCAG
TGGAGCAAATATCATGTGTCCTGGCTTAACTTCTCCAGGAGCCAAGCTTTATCCTGCTGCAGCAGATACCATTGTTGCAA
TCATGGCAGAAGGAAAACAGCATGCTCTATGTGTTGGAGTCATGAAGATGTCTGCAGAAGATATTGAGAAAGTCAACAAA
GGAATTGGCATTGAAAATATCCATTATTTAAATGATGGGCTGTGGCACATGAAGACATATAAATGA

Library Parental gene expression (RPM)
SRP017611_liver 13 .67 RPM
SRP017611_kidney 11 .41 RPM
SRP017611_brain 14 .49 RPM
SRP040447_lung 8 .98 RPM
SRP040447_skeletal_muscle 7 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000034992 ortholog_one2one 1 retrogene
retro_btau_116,
Canis familiaris ENSCAFG00000018545 ortholog_one2one 1 retrogene
retro_cfam_94,
Equus caballus ENSECAG00000014597 ortholog_one2one 1 retrogene
retro_ecab_697,
Erinaceus europaeus ENSEEUG00000007258 ortholog_one2one 1 retrogene
retro_eeur_197,
Echinops telfairi ENSETEG00000015462 ortholog_one2many 1 retrogene
retro_etel_19,
Homo sapiens ENSG00000232119 ortholog_one2one 1 retrogene
retro_hsap_2422,
Gorilla gorilla ENSGGOG00000009420 ortholog_one2one 1 retrogene
retro_ggor_1507,
Myotis lucifugus ENSMLUG00000015101 ortholog_one2one 1 retrogene
retro_mluc_16,
Macaca mulatta ENSMMUG00000009043 ortholog_one2one 1 retrogene
retro_mmul_626,
Monodelphis domestica ENSMODG00000010354 ortholog_one2one 1 retrogene
retro_mdom_203,
Mustela putorius furo ENSMPUG00000001407 ortholog_one2one 1 retrogene
retro_mputfur_98,
Mus musculus ENSMUSG00000000355 ortholog_one2many 3 retrogenes
retro_mmus_2504, retro_mmus_2505, retro_mmus_69,
Nomascus leucogenys ENSNLEG00000015021 ortholog_one2one 1 retrogene
retro_nleu_2442,
Oryctolagus cuniculus ENSOCUG00000014315 ortholog_one2many 1 retrogene
retro_ocun_212,
Pan troglodytes ENSPTRG00000022241 ortholog_one2one 1 retrogene
retro_ptro_1396,
Pteropus vampyrus ENSPVAG00000013249 ortholog_one2one 3 retrogenes
retro_pvam_1323, retro_pvam_645, retro_pvam_867,
Rattus norvegicus ENSRNOG00000002563 ortholog_one2one 2 retrogenes
retro_rnor_1841, retro_rnor_957,
Ictidomys tridecemlineatus ENSSTOG00000011496 ortholog_one2many 2 retrogenes
retro_itri_1136, retro_itri_1468,
Tupaia belangeri ENSTBEG00000010666 ortholog_one2one 2 retrogenes
retro_tbel_1485, retro_tbel_4265,
Tarsius syrichta ENSTSYG00000001440 ortholog_one2one 1 retrogene
retro_tsyr_55,
Tursiops truncatus ENSTTRG00000007208 ortholog_one2one 1 retrogene
retro_ttru_1587,
Vicugna pacos ENSVPAG00000001801 ortholog_one2one 1 retrogene
retro_vpac_138,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1411 91.16 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000005502 retrocopies