Parental gene: | COMMD2, ENSCPOG00000005273 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_8:46409075..46423207(-) |
>ENSCPOG00000005273
ATGCTGCTGGACTTGTCCGAGGAGCATAAGGAGCACCTGGCTTTCCTGCCGCAAGTGGACAGCGCCGTGGTCGCCGAGTT
CGGGCGGATTGCGGTGGAGTTCCTGAGGCGAGGATCGAACCCTAAGATCTACGAAGGCGCCGCCAGAAAACTCAATGTGA
GTAGTGAAACGGTCCAGCATGGTGTGGAAGGATTAACGTATCTCCTCACTGAGAGCTCAAAGCTTATGATATCTGAACTG
GATTTCCAAGACTCTGTTTTTGTTTTGGGATTCTCTGAAGAATTAAACAAATTATTGCTTCAGCTTTATCTGGACAACAG
AAAGGAGATCAGAACTATTCTAAATGAACTAACACCTGACCTTCCCACTTACCATAGCCTTGAATGGCGACTAGATGTAC
AGCTTGCAAGCAGAAGTCTCCGGCAACAGATTAAACCAGCGGTGACTTTCAAGCTTCACCTTAATCACAATGGAGATCAC
AACACCAAAGTTCTGCAGACAGACCCCGCCACCCTGCTTCATTTAGTGCAGCAGCTGGAGCAAGCACTGGAGGAGATGAA
GACAAACCACTGCAGGAGAGTGGTCCGCAACATCAAGTAG
ATGCTGCTGGACTTGTCCGAGGAGCATAAGGAGCACCTGGCTTTCCTGCCGCAAGTGGACAGCGCCGTGGTCGCCGAGTT
CGGGCGGATTGCGGTGGAGTTCCTGAGGCGAGGATCGAACCCTAAGATCTACGAAGGCGCCGCCAGAAAACTCAATGTGA
GTAGTGAAACGGTCCAGCATGGTGTGGAAGGATTAACGTATCTCCTCACTGAGAGCTCAAAGCTTATGATATCTGAACTG
GATTTCCAAGACTCTGTTTTTGTTTTGGGATTCTCTGAAGAATTAAACAAATTATTGCTTCAGCTTTATCTGGACAACAG
AAAGGAGATCAGAACTATTCTAAATGAACTAACACCTGACCTTCCCACTTACCATAGCCTTGAATGGCGACTAGATGTAC
AGCTTGCAAGCAGAAGTCTCCGGCAACAGATTAAACCAGCGGTGACTTTCAAGCTTCACCTTAATCACAATGGAGATCAC
AACACCAAAGTTCTGCAGACAGACCCCGCCACCCTGCTTCATTTAGTGCAGCAGCTGGAGCAAGCACTGGAGGAGATGAA
GACAAACCACTGCAGGAGAGTGGTCCGCAACATCAAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .44 RPM |
| SRP017611_kidney | 12 .56 RPM |
| SRP017611_brain | 6 .15 RPM |
| SRP040447_lung | 14 .17 RPM |
| SRP040447_skeletal_muscle | 8 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013809 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000043386 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000010888 | ortholog_one2one | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000003545 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003450 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_520 | 73.15 | 73.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_956 | 68.71 | 73.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000005273 retrocopies