Parental gene: | ATP5B, ENSCJAG00000033571 |
| Aliases: | None |
| Description: | ATP synthase subunit beta [Source:UniProtKB/TrEMBL;Acc:F7E965] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:45466480..45477303(-) |
>ENSCJAG00000033571
ATGTTGGGACTTGTGGGTCGTGTGGCCGCTACCTCGGCCTCCGGGGCCTTGCGGGGACTGAGCCCTTCAGCGTCGCTACC
CCCAGCGCAGCTCTTACTGCGGGCCACTCCAACGGCGGTCTATCCTGTCAGGGACTATGCGGCTCAAACATCTCCTTCGC
CGAAGGCAGGCGCCGCTACCGGGCGCATCGTGGCGGTCATTGGCGCAGTGGTGGACGTCCAGTTTGATGAGGGACTACCA
CCGATCCTAAATGCCCTGGAAGTGCAAGGCAGGGAGACCAGACTGGTTTTGGAGGTGGCCCAGCATTTGGGTGAGAGCAC
AGTTAGGACCATTGCTATGGATGGTACAGAGGGCTTGGTTAGAGGCCAGAAAGTACTGGATTCTGGTGCACCAATCAAAA
TTCCTGTTGGTCCTGAGACTTTGGGCAGAATTATGAATGTCATTGGAGAACCTATTGATGAAAGAGGTCCCATCAAAACC
AAACAATTTGCTCCCATTCATGCTGAGGCTCCTGAATTCATGGAAATGAGTGTTGAGCAGGAAATTCTGGTGACTGGTAT
CAAGGTTGTGGATCTGCTAGCTCCCTATGCCAAGGGTGGCAAAATTGGGCTTTTTGGTGGTGCTGGAGTTGGCAAGACTG
TACTGATCATGGAGTTAATCAACAATGTTGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAGAGGACC
CGTGAAGGCAATGATTTATACCATGAAATGATTGAGTCTGGTGTTATCAACTTAAAAGATGCCACCTCTAAGGTAAGCAC
TGGGTTGATTGATGTCCACATGGTGGTTATGCCGGGAAACTATTGCCAACTGAAGCCATGTTTATTGACATTAAATAGTA
TTTCCAAGCCACCGCGCCTGGCCCAGGTTTTCTTTTTGGTAGATAGTCCCCTAATTTTTGGGAGGGGTGGATTGGATGTG
GATCTTTATCTTAGTAATATAAGAAGCTGTCTTTTTGGCCAGGAGCGATGGCTCACACCTGTAATTGCTGTCTTAAATCC
CATCTCTACTGAAAATACAAAAAATGTTATCTCGGTTCATGCCATCTATGTGCCTGCTGATGACTTGACTGACCCTGCCC
CTGCTACTACATTTGCCCATTTGGATGCTACCACTGTACTGTCACGTGCCATTGCTGAGCTGGGCATCTATCCAGCTGTG
GATCCTCTGGACTCCACTTCTCGCATCATGGATCCCAACATTGTTGGCAGTGAGCATTATGATGTTGCCCGTGGGGTGCA
AAAGATCCTGCAAGACTACAAATCCCTCCAGGATATCATTGCCATCCTGGGTATGGATGAACTTTCTGAGGAAGACAAGT
TGACTGTGTCCCGTGCACGGAAAATACAGCGTTTCTTGTCCCAGCCATTCCAGGTTGCTGAGGTCTTCACAGGTCATATG
GGGAAGCTGGTACCCCTGAAGGAGACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGAATATGACCATCTCCCAGAACA
GGCCTTCTATATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAGCTGGCTGAAGAGCATTCATCATGA
ATGTTGGGACTTGTGGGTCGTGTGGCCGCTACCTCGGCCTCCGGGGCCTTGCGGGGACTGAGCCCTTCAGCGTCGCTACC
CCCAGCGCAGCTCTTACTGCGGGCCACTCCAACGGCGGTCTATCCTGTCAGGGACTATGCGGCTCAAACATCTCCTTCGC
CGAAGGCAGGCGCCGCTACCGGGCGCATCGTGGCGGTCATTGGCGCAGTGGTGGACGTCCAGTTTGATGAGGGACTACCA
CCGATCCTAAATGCCCTGGAAGTGCAAGGCAGGGAGACCAGACTGGTTTTGGAGGTGGCCCAGCATTTGGGTGAGAGCAC
AGTTAGGACCATTGCTATGGATGGTACAGAGGGCTTGGTTAGAGGCCAGAAAGTACTGGATTCTGGTGCACCAATCAAAA
TTCCTGTTGGTCCTGAGACTTTGGGCAGAATTATGAATGTCATTGGAGAACCTATTGATGAAAGAGGTCCCATCAAAACC
AAACAATTTGCTCCCATTCATGCTGAGGCTCCTGAATTCATGGAAATGAGTGTTGAGCAGGAAATTCTGGTGACTGGTAT
CAAGGTTGTGGATCTGCTAGCTCCCTATGCCAAGGGTGGCAAAATTGGGCTTTTTGGTGGTGCTGGAGTTGGCAAGACTG
TACTGATCATGGAGTTAATCAACAATGTTGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAGAGGACC
CGTGAAGGCAATGATTTATACCATGAAATGATTGAGTCTGGTGTTATCAACTTAAAAGATGCCACCTCTAAGGTAAGCAC
TGGGTTGATTGATGTCCACATGGTGGTTATGCCGGGAAACTATTGCCAACTGAAGCCATGTTTATTGACATTAAATAGTA
TTTCCAAGCCACCGCGCCTGGCCCAGGTTTTCTTTTTGGTAGATAGTCCCCTAATTTTTGGGAGGGGTGGATTGGATGTG
GATCTTTATCTTAGTAATATAAGAAGCTGTCTTTTTGGCCAGGAGCGATGGCTCACACCTGTAATTGCTGTCTTAAATCC
CATCTCTACTGAAAATACAAAAAATGTTATCTCGGTTCATGCCATCTATGTGCCTGCTGATGACTTGACTGACCCTGCCC
CTGCTACTACATTTGCCCATTTGGATGCTACCACTGTACTGTCACGTGCCATTGCTGAGCTGGGCATCTATCCAGCTGTG
GATCCTCTGGACTCCACTTCTCGCATCATGGATCCCAACATTGTTGGCAGTGAGCATTATGATGTTGCCCGTGGGGTGCA
AAAGATCCTGCAAGACTACAAATCCCTCCAGGATATCATTGCCATCCTGGGTATGGATGAACTTTCTGAGGAAGACAAGT
TGACTGTGTCCCGTGCACGGAAAATACAGCGTTTCTTGTCCCAGCCATTCCAGGTTGCTGAGGTCTTCACAGGTCATATG
GGGAAGCTGGTACCCCTGAAGGAGACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGAATATGACCATCTCCCAGAACA
GGCCTTCTATATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAGCTGGCTGAAGAGCATTCATCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 50 .06 RPM |
| SRP051959_skeletal_muscle | 312 .72 RPM |
| SRP051959_lymph_node | 51 .50 RPM |
| SRP051959_lung | 45 .04 RPM |
| SRP051959_liver | 148 .64 RPM |
| SRP051959_kidney | 142 .35 RPM |
| SRP051959_heart | 246 .72 RPM |
| SRP051959_colon | 107 .50 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000016752 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000013315 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005350 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011289 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000010208 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000110955 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000011596 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002875 | ortholog_one2one | 6 retrogenes | |
| Microcebus murinus | ENSMICG00000001084 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000001027 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004668 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005107 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000000405 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000002144 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000004025 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_928 | 84.56 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1488 | 75.75 | 68.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000033571 retrocopies