Parental gene:

ATP5B, ENSBTAG00000013315

Aliases:None
Description:ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P00829]
Organism:Cow (Bos taurus)
Coordinates:5:57119916..57125290(+)


>ENSBTAG00000013315
ATGTTGGGACTTGTGGGTCGTGTGGTTGCTGCCTCGGCCTCCGGGGCCTTGCGGGGACTCAGCCCTTCAGCGCCGCTACC
GCAAGCCCAGCTTTTACTGCGGGCCGCTCCTGCAGCGCTCCAGCCTGCCAGAGACTATGCCGCTCAAGCATCTCCATCGC
CAAAGGCCGGCGCCACCACTGGGCGCATCGTGGCGGTCATTGGTGCAGTGGTGGACGTCCAGTTTGATGAGGGACTGCCT
CCCATCCTAAATGCCCTGGAGGTGCAAGGCAGGGAGACCAGGCTGGTTTTGGAGGTGGCCCAGCATTTGGGTGAGAGCAC
AGTAAGGACCATTGCTATGGATGGTACAGAAGGCTTGGTTAGAGGTCAGAAAGTCCTGGATTCTGGTGCACCAATCAGAA
TTCCTGTTGGCCCTGAGACCTTGGGTAGAATCATGAACGTCATTGGAGAACCTATTGATGAGAGGGGTCCCATCAAAACC
AAGCAATTTGCTGCTATTCATGCTGAGGCTCCTGAATTCGTGGAGATGAGTGTTGAACAAGAAATTCTGGTTACTGGTAT
TAAGGTTGTAGATCTGCTGGCTCCATATGCCAAGGGTGGCAAAATTGGGCTTTTTGGTGGTGCTGGAGTCGGCAAGACAG
TACTGATCATGGAGTTAATCAACAATGTTGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAAAGGACC
CGTGAGGGCAATGACTTATACCATGAAATGATTGAGTCTGGTGTTATCAACTTAAAAGATGCTACCTCTAAGGTAGCGCT
GGTGTACGGTCAAATGAATGAACCACCTGGTGCTCGGGCCCGGGTTGCTCTGACTGGGCTGACTGTAGCTGAGTACTTCA
GAGACCAAGAAGGTCAAGATGTGTTGCTGTTTATTGATAACATCTTTCGCTTCACCCAGGCTGGCTCAGAGGTGTCTGCT
TTATTGGGCAGAATCCCTTCTGCTGTGGGTTATCAGCCTACCCTGGCCACTGACATGGGTACCATGCAGGAAAGAATCAC
CACCACCAAAAAGGGATCTATCACCTCTGTACAGGCTATCTATGTGCCTGCTGATGACTTGACGGATCCTGCCCCGGCCA
CTACCTTTGCCCATTTGGATGCTACCACTGTGTTGTCCCGTGCTATTGCTGAGCTGGGCATCTATCCAGCTGTGGATCCT
TTGGACTCCACGTCTCGCATCATGGATCCCAACATTGTTGGCAGTGAGCATTATGATGTTGCCCGTGGGGTGCAAAAGAT
TCTGCAGGACTACAAATCCCTCCAGGACATCATTGCTATCCTGGGTATGGATGAACTTTCTGAAGAAGATAAGTTAACTG
TGTCTCGTGCACGGAAAATCCAGCGTTTCTTGTCTCAGCCATTCCAGGTGGCTGAGGTCTTTACTGGTCATTTGGGGAAG
CTGGTACCCCTCAAGGAGACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGAATATGACCATCTCCCAGAACAGGCCTT
CTATATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAGTTGGCTGAAGAGCACTCATGA

Library Parental gene expression (RPM)
SRP017611_brain 424 .41 RPM
SRP017611_kidney 1353 .35 RPM
SRP017611_liver 289 .73 RPM
ERP005899_muscle 863 .05 RPM
ERP005899_liver 212 .11 RPM
SRP030211_testis 249 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016752 ortholog_one2one 1 retrogene
retro_acar_181,
Choloepus hoffmanni ENSCHOG00000005350 ortholog_one2one 1 retrogene
retro_chof_1544,
Callithrix jacchus ENSCJAG00000033571 ortholog_one2one 2 retrogenes
retro_cjac_1488, retro_cjac_928,
Dasypus novemcinctus ENSDNOG00000011289 ortholog_one2one 1 retrogene
retro_dnov_361,
Echinops telfairi ENSETEG00000010208 ortholog_one2many 1 retrogene
retro_etel_2162,
Homo sapiens ENSG00000110955 ortholog_one2one 1 retrogene
retro_hsap_2128,
Gorilla gorilla ENSGGOG00000011596 ortholog_one2one 1 retrogene
retro_ggor_1648,
Macropus eugenii ENSMEUG00000002875 ortholog_one2one 6 retrogenes
retro_meug_1416, retro_meug_1608, retro_meug_411, retro_meug_430, retro_meug_685, retro_meug_908,
Microcebus murinus ENSMICG00000001084 ortholog_one2one 1 retrogene
retro_mmur_495,
Macaca mulatta ENSMMUG00000001027 ortholog_one2many 1 retrogene
retro_mmul_103,
Pongo abelii ENSPPYG00000004668 ortholog_one2one 2 retrogenes
retro_pabe_1921, retro_pabe_2032,
Pan troglodytes ENSPTRG00000005107 ortholog_one2one 1 retrogene
retro_ptro_1557,
Sus scrofa ENSSSCG00000000405 ortholog_one2one 1 retrogene
retro_sscr_453,
Tarsius syrichta ENSTSYG00000009962 ortholog_one2one 1 retrogene
retro_tsyr_644,
Tursiops truncatus ENSTTRG00000002144 ortholog_one2one 1 retrogene
retro_ttru_371,
Vicugna pacos ENSVPAG00000004025 ortholog_one2one 2 retrogenes
retro_vpac_405, retro_vpac_562,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1264 73.40 52.84
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Download FASTA sequences of all ENSBTAG00000013315 retrocopies