Parental gene:

ENSCJAG00000019788

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:131566159..131567898(+)


>ENSCJAG00000019788
ATGCCCAAGTGCCCCAAGTGCGAGAAGGAGGTGTACTTCGCTGAGAGGGTGACCTCTCTGGGCAAGGACTGGCATCGGCC
TTGCCTGAAGTGCGAGAAATGTGGGAAGACGCTGACCTCCGGCGGCCACGCTGAGCACGAAGGCAAACCCTACTGCAACC
ATCCCTGCTACTCCGCCATGTTTGGGCCTAAAGGCTTTGGGCGGGGTGGAGCTGAGAGCCACACTTTCAAGTAA

Library Parental gene expression (RPM)
SRP051959_spleen 7 .54 RPM
SRP051959_skeletal_muscle 2 .99 RPM
SRP051959_lymph_node 18 .42 RPM
SRP051959_lung 16 .01 RPM
SRP051959_liver 3 .96 RPM
SRP051959_kidney 4 .81 RPM
SRP051959_heart 12 .31 RPM
SRP051959_colon 21 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000047229 ortholog_one2many 1 retrogene
retro_btau_488,
Callithrix jacchus ENSCJAG00000019153 within_species_paralog 6 retrogenes
retro_cjac_1266, retro_cjac_1285, retro_cjac_1384, retro_cjac_1555, retro_cjac_2919, retro_cjac_3150,
Dipodomys ordii ENSDORG00000001365 ortholog_one2many 1 retrogene
retro_dord_70,
Homo sapiens ENSG00000213145 ortholog_many2many 1 retrogene
retro_hsap_2550,
Gorilla gorilla ENSGGOG00000027381 ortholog_one2many 1 retrogene
retro_ggor_3,
Macropus eugenii ENSMEUG00000001631 ortholog_one2many 1 retrogene
retro_meug_93,
Macaca mulatta ENSMMUG00000007158 ortholog_one2many 2 retrogenes
retro_mmul_1479, retro_mmul_553,
Pongo abelii ENSPPYG00000006209 ortholog_one2many 1 retrogene
retro_pabe_114,
Pan troglodytes ENSPTRG00000033768 ortholog_one2many 1 retrogene
retro_ptro_43,
Pteropus vampyrus ENSPVAG00000014240 ortholog_one2many 1 retrogene
retro_pvam_1304,
Rattus norvegicus ENSRNOG00000027990 ortholog_one2many 2 retrogenes
retro_rnor_2590, retro_rnor_2599,
Sarcophilus harrisii ENSSHAG00000000807 ortholog_one2many 1 retrogene
retro_shar_341,
Tursiops truncatus ENSTTRG00000004063 ortholog_one2many 1 retrogene
retro_ttru_1367,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_163 98.70 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCJAG00000019788 retrocopies