Parental gene: | DCUN1D4, ENSCJAG00000018601 |
| Aliases: | None |
| Description: | DCN1, defective in cullin neddylation 1, domain containing 4 [Source:HGNC Symbol;Acc:28998] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 3:141537076..141617405(-) |
>ENSCJAG00000018601
ATGGAGGTGGAGGCGGCGTTGGGCTCTAGCGGGCTGGGCCGGGGGGTGGAACCGTCGGAGAGAGGGAGGGAGCGAGCGAG
CGGGCGCAGGGTGAGGATTTCCAAGGGGCTGAACGGTGCGGGCTGCTCTGTGAGAAAGGCGGACTTTCAGCTGAACTCCC
ATCTGTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTAAACCTAACAGAAGACGTTGGCCAAGAC
GATCACCAAACAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAG
ACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATAGAAAATATGATTCAACTAGAATAA
AGACTGAAGAAGAAGCTTTTTCAAGTAAAAGGTGCTTAGAATGGTTCTATGAATATGCAGGCACTGATGATGTTGTAGGC
CCTGAAGGCATGGAGAAATTTTGTGAAGACATTGGTGTTGAACCAGAAAACGTAGTTATGCTTGTCCTGGCTTGGAAATT
GGATGCACAAAACATGGGCTATTTTACTCTACAAGAGTGGTTAAAAGGAATGACTTCTCTCCAATGTGACACAACAGAAA
AACTCAGAAATACTTTGGATTACTTAAGATCATTATTAAATGATTCTACAAACTTTAAACTTATTTACAGATATGCGTTT
GACTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAAT
CTGGCCCCTTTTTCCAGTTTTTCACCAATTCTTAGAGCAATCAAAATATAAAGTTATTAATAAAGACCAGTGGTGCAATG
TCCTAGAGTTTAGCAGAACAATTAATCTTGACCTCAGCAACTATGATGAAGATGGAGCTTGGCCAGTTTTGTTGGACGAG
TTTGTGGAGTGGTATAAAGACAAACAGATGTCCTAG
ATGGAGGTGGAGGCGGCGTTGGGCTCTAGCGGGCTGGGCCGGGGGGTGGAACCGTCGGAGAGAGGGAGGGAGCGAGCGAG
CGGGCGCAGGGTGAGGATTTCCAAGGGGCTGAACGGTGCGGGCTGCTCTGTGAGAAAGGCGGACTTTCAGCTGAACTCCC
ATCTGTCAACACTGGCAAATATTCATAAGATCTACCACACCCTTAATAAGCTAAACCTAACAGAAGACGTTGGCCAAGAC
GATCACCAAACAGGAAGTCTGCGGTCTTGCAGTTCTTCAGACTGCTTTAATAAAGTGATGCCACCAAGGAAAAAGAGAAG
ACCTGCCTCTGGAGATGATTTATCTGCCAAGAAAAGTAGACATGATAGCATGTATAGAAAATATGATTCAACTAGAATAA
AGACTGAAGAAGAAGCTTTTTCAAGTAAAAGGTGCTTAGAATGGTTCTATGAATATGCAGGCACTGATGATGTTGTAGGC
CCTGAAGGCATGGAGAAATTTTGTGAAGACATTGGTGTTGAACCAGAAAACGTAGTTATGCTTGTCCTGGCTTGGAAATT
GGATGCACAAAACATGGGCTATTTTACTCTACAAGAGTGGTTAAAAGGAATGACTTCTCTCCAATGTGACACAACAGAAA
AACTCAGAAATACTTTGGATTACTTAAGATCATTATTAAATGATTCTACAAACTTTAAACTTATTTACAGATATGCGTTT
GACTTTGCACGGGAAAAGGACCAGCGCAGCCTAGACATAAACACTGCCAAGTGCATGTTGGGACTGTTATTAGGAAAAAT
CTGGCCCCTTTTTCCAGTTTTTCACCAATTCTTAGAGCAATCAAAATATAAAGTTATTAATAAAGACCAGTGGTGCAATG
TCCTAGAGTTTAGCAGAACAATTAATCTTGACCTCAGCAACTATGATGAAGATGGAGCTTGGCCAGTTTTGTTGGACGAG
TTTGTGGAGTGGTATAAAGACAAACAGATGTCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 20 .21 RPM |
| SRP051959_skeletal_muscle | 10 .74 RPM |
| SRP051959_lymph_node | 19 .84 RPM |
| SRP051959_lung | 18 .61 RPM |
| SRP051959_liver | 13 .54 RPM |
| SRP051959_kidney | 21 .59 RPM |
| SRP051959_heart | 25 .10 RPM |
| SRP051959_colon | 13 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005148 | within_species_paralog | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000008945 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017879 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3959 | 94.63 | 79.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018601 retrocopies