Parental gene: | SRP72, ENSCJAG00000017998 |
| Aliases: | None |
| Description: | signal recognition particle 72kDa [Source:HGNC Symbol;Acc:11303] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 3:137034433..137070291(-) |
>ENSCJAG00000017998
ATGGCGAGCGGCGGCAGCGGGGGGGTTTCAGTGCCTGCGCTGTGGAGTGAAGTGAACCGGTATGGCCAGAACGGCGACTT
CACGCGCGCTCTCAAGACCGTCAATAAGATACTACAGAGCAACAAAGATGATGTAACTGCCCTGCATTGTAAAGTGGTAT
GCCTTATCCAGAATGGAAGTTTCAAGGAAGCCTTGAATGTCATCAATACTCACACCAAAGTGTTAGCCAATAACTCTCTC
TCCTTTGAAAAGGCATATTGCGAGTACAGGCTAAACAGAATTGAGAATGCCTTGAAGACGATAGAAAATTCCACCCAGCA
GACAGACAAACTGAAGGAGCTTTATGGACAAGTGTTATACCGTTTGGAACGCTATGATGAATGCTTAGTGGTATATAGAG
ATCTTGTCCGAAACTCCCAAGATGATTATGATGAGGAGAGGAAAACAAACCTTTCAGCAGTTGTTGCAGCTCAGAGCAAT
TGGGAAAAAGTGGTTCCGGAGAACTTGGGCTTCCAGGAAGGCACACACGAGCTGTGCTACAACACTGCATGTGCACTGAT
AGGCCAAGGCCAGCTGAACCAAGCCATGAAAATCCTGCAAAAAGCTGAAGTAGATCTTTGCCGCCGTTCATTATCAGAAG
ATGCTGATGGGACTGAGGAGGACCCACAGGCAGAACTGGCCATCATTCATGGTCAGATGGCCTATATTCTGCAGCTTCAG
GGTCGAACAGAGGAGGCTTTGCAACTTTACAATCAAATAATAAAACTAAAACCAACAGATGTGGGATTACTAGCTGTAAT
TGCAAATAACATCATTACCATTAACAAGGACCAAAATGTCTTTGACTCTAAGAAGAAAGTGAAATTAACCAATGCGGAAG
GAGTAGAGTTTAAGCTTTCCAAGAAACAGCTACAAGCTATAGAGTTTAACAAAGCTTTACTTGCTATGTATACAAACCAG
GCAGAACAATGCCGCAGAATATCTGCCAGTTTACAGTCCCAAAGCCCTGAGCATCTCTTACCTGTGTTAATCCAAGCTGC
CCAGCTCTGCCGTGAAAAGCAGCACACAAAAGCAATTGAGCTGCTTCAGGAATTTTCAGATCAGCATCCAGAAAATGCAG
CTGAAATTAAGCTGACCATGGCACAGTTGAAAATTTCTCAAGGTAATATTTCTAAAGCATGTCTAATATTGAGAAGCATA
CAGGAGTTAAATCATAAACCAGGCATGGTGTCTGCATTAGTGACCATGTATAGTCATGAAGAAGATATTGATAGTGCCAT
TGAGGTCTTCACACAAGCTATCCAGTGGTATCAAAGCCATCAGCCCAAATCTGCTGCTCATTTGTCCTTGATAAGAGAAG
CTGCAAACTTCAAACTCAAATATGGGCGGAAGAAGGAGGCAATTAGTGACCTAGAACAGCTATGGAAACAAAATCCAAAA
GATATTCACACCCTTGCACAGCTTATTTCTGCTTACTCGCTTGTAGATCCAGAGAAAGCCAAAGCTCTTAGTAAACACTT
GCCATCGTCAGATAGTATGTCTCTCAAAGTAGATGTTGAGGCTCTTGAAAATTCTCCTGGTGCTACATATATTCGGAAAA
AGGGTGGAAAAGTTACTGGAGATAGTCAACCAAAGGAACAAGGACAGGGAGATTTGAAAAAGAAGAAAAAGAAAAAGAAG
GGAAAATTGCCTAAGAATTACGACCCAAAAGTTACCCCAGATCCAGAAAGATGGCTGCCAATGCGAGAACGTTCTTACTA
CCGGGGAAGAAAGAAGGGTAAAAAGAAGGATCAGATTGGAAAAGGGACCCAGGGAGCAACTACAGGAGCTTCATCTGAAC
TGGATGCCAGTAAAACTGTGAGCAGCCCACCCACCTCCCCAAGACCTGGCAGTGCAGCAACAGTATCTGCCTCTACAAGT
AACATCATACCCCCAAGACACCAGAAACCTGCAGGGGCTCCAGCAACAAAAAAGAAACAGCAACAGAAAAAGAAGAAAGG
TGGAAAAGGTGGCTGGTGA
ATGGCGAGCGGCGGCAGCGGGGGGGTTTCAGTGCCTGCGCTGTGGAGTGAAGTGAACCGGTATGGCCAGAACGGCGACTT
CACGCGCGCTCTCAAGACCGTCAATAAGATACTACAGAGCAACAAAGATGATGTAACTGCCCTGCATTGTAAAGTGGTAT
GCCTTATCCAGAATGGAAGTTTCAAGGAAGCCTTGAATGTCATCAATACTCACACCAAAGTGTTAGCCAATAACTCTCTC
TCCTTTGAAAAGGCATATTGCGAGTACAGGCTAAACAGAATTGAGAATGCCTTGAAGACGATAGAAAATTCCACCCAGCA
GACAGACAAACTGAAGGAGCTTTATGGACAAGTGTTATACCGTTTGGAACGCTATGATGAATGCTTAGTGGTATATAGAG
ATCTTGTCCGAAACTCCCAAGATGATTATGATGAGGAGAGGAAAACAAACCTTTCAGCAGTTGTTGCAGCTCAGAGCAAT
TGGGAAAAAGTGGTTCCGGAGAACTTGGGCTTCCAGGAAGGCACACACGAGCTGTGCTACAACACTGCATGTGCACTGAT
AGGCCAAGGCCAGCTGAACCAAGCCATGAAAATCCTGCAAAAAGCTGAAGTAGATCTTTGCCGCCGTTCATTATCAGAAG
ATGCTGATGGGACTGAGGAGGACCCACAGGCAGAACTGGCCATCATTCATGGTCAGATGGCCTATATTCTGCAGCTTCAG
GGTCGAACAGAGGAGGCTTTGCAACTTTACAATCAAATAATAAAACTAAAACCAACAGATGTGGGATTACTAGCTGTAAT
TGCAAATAACATCATTACCATTAACAAGGACCAAAATGTCTTTGACTCTAAGAAGAAAGTGAAATTAACCAATGCGGAAG
GAGTAGAGTTTAAGCTTTCCAAGAAACAGCTACAAGCTATAGAGTTTAACAAAGCTTTACTTGCTATGTATACAAACCAG
GCAGAACAATGCCGCAGAATATCTGCCAGTTTACAGTCCCAAAGCCCTGAGCATCTCTTACCTGTGTTAATCCAAGCTGC
CCAGCTCTGCCGTGAAAAGCAGCACACAAAAGCAATTGAGCTGCTTCAGGAATTTTCAGATCAGCATCCAGAAAATGCAG
CTGAAATTAAGCTGACCATGGCACAGTTGAAAATTTCTCAAGGTAATATTTCTAAAGCATGTCTAATATTGAGAAGCATA
CAGGAGTTAAATCATAAACCAGGCATGGTGTCTGCATTAGTGACCATGTATAGTCATGAAGAAGATATTGATAGTGCCAT
TGAGGTCTTCACACAAGCTATCCAGTGGTATCAAAGCCATCAGCCCAAATCTGCTGCTCATTTGTCCTTGATAAGAGAAG
CTGCAAACTTCAAACTCAAATATGGGCGGAAGAAGGAGGCAATTAGTGACCTAGAACAGCTATGGAAACAAAATCCAAAA
GATATTCACACCCTTGCACAGCTTATTTCTGCTTACTCGCTTGTAGATCCAGAGAAAGCCAAAGCTCTTAGTAAACACTT
GCCATCGTCAGATAGTATGTCTCTCAAAGTAGATGTTGAGGCTCTTGAAAATTCTCCTGGTGCTACATATATTCGGAAAA
AGGGTGGAAAAGTTACTGGAGATAGTCAACCAAAGGAACAAGGACAGGGAGATTTGAAAAAGAAGAAAAAGAAAAAGAAG
GGAAAATTGCCTAAGAATTACGACCCAAAAGTTACCCCAGATCCAGAAAGATGGCTGCCAATGCGAGAACGTTCTTACTA
CCGGGGAAGAAAGAAGGGTAAAAAGAAGGATCAGATTGGAAAAGGGACCCAGGGAGCAACTACAGGAGCTTCATCTGAAC
TGGATGCCAGTAAAACTGTGAGCAGCCCACCCACCTCCCCAAGACCTGGCAGTGCAGCAACAGTATCTGCCTCTACAAGT
AACATCATACCCCCAAGACACCAGAAACCTGCAGGGGCTCCAGCAACAAAAAAGAAACAGCAACAGAAAAAGAAGAAAGG
TGGAAAAGGTGGCTGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 28 .99 RPM |
| SRP051959_skeletal_muscle | 20 .11 RPM |
| SRP051959_lymph_node | 24 .73 RPM |
| SRP051959_lung | 22 .87 RPM |
| SRP051959_liver | 37 .28 RPM |
| SRP051959_kidney | 21 .32 RPM |
| SRP051959_heart | 15 .05 RPM |
| SRP051959_colon | 25 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000174780 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008806 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012226 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002100 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2538 | 98.37 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017998 retrocopies