Parental gene: | CSNK1G3, ENSCJAG00000017348 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:82488603..82592587(-) |
>ENSCJAG00000017348
ATGGAAAATAAAAAGAAAGACAAGGACAAATCAGATGATAGAATGGCACGACCTAGTGGTCGATCGGGGCACAACACTCG
AGGAACTGGGTCTTCATCGTCTGGAGTTTTAATGGTTGGACCTAACTTTAGAGTTGGAAAAAAAATTGGATGTGGCAATT
TTGGAGAATTACGATTAGGGAAAAATTTATACACAAATGAATATGTGGCAATTAAGCTGGAGCCCATGAAATCCAGAGCA
CCACAGCTACATTTGGAATACAGATTCTATAAGCAGTTAGGATCTGGAGATGGTATACCTCAAGTTTACTATTTTGGCCC
TTGTGGTAAATACAATGCTATGGTGCTGGAACTGCTGGGACCTAGTTTGGAAGACTTGTTTGACTTGTGTGACAGAACAT
TTTCTCTTAAAACAGTTCTCATGATAGCTATACAACTGACCAAGATTTCTCGCATGGAATATGTCCATTCAAAGAACTTG
ATATACAGAGATGTAAAACCTGAGAACTTCTTAATAGGACGACCAGGAAACAAAACCCAGCAAGTTATTCATATTATAGA
TTTTGGTTTGGCAAAGGAATATATTGATCCAGAGACAAAGAAACACATACCTTACAGAGAACACAAGAGCCTTACAGGAA
CAGCTAGATATATGAGCATAAACACACATTTAGGAAAAGAACAAAGTAGAAGAGATGATTTAGAAGCTTTAGGTCATATG
TTCATGTATTTTCTGAGAGGCAGTCTTCCTTGGCAAGGCTTAAAGGCTGATACATTAAAGGAGAGGTATCAGAAAATTGG
AGATACAAAACGAGCTACACCAATAGAAGTGTTATGTGAAAATTTTCCAGAAGAAATGGCAACATATCTTCGTTATGTAA
GAAGGCTAGATTTTTTTGAAAAACCAGACTATGACTACTTAAGAAAGCTTTTTACTGACTTGTTTGATCGAAAAGGATAT
ATGTTTGATTATGAATATGACTGGATTGGTAAACAGTTGCCTACTCCAGTGGGTGCAGTTCAGCAAGATCCTGCTCTGTC
ATCAAACAGAGAAGCACATCAACACAGAGATAAGATGCAACAATCCAAAAACCAGTCGGCAGACCACAGGGCAACTTGGG
ACTCCCAGCAGGCAAATCCCCACCATTTGAGAGCTCACCTTGCAGCAGACAGACATGGTGGCTCGGTACAGGTTGTAAGT
TCTACAAATGGAGAGTTAAACACAGATGATCCCACTGCAGGACGTTCAAATGCACCCATCACAGCCCCTACTGAAGTAGA
AGTGATGGATGAAACCAACTGCCAGAAAGTGTTGAACATGTGGTGCTGCTGTTTTTTCAAACGAAGGAAAAGGAAAACTA
TACAGCGCCACAAATGA
ATGGAAAATAAAAAGAAAGACAAGGACAAATCAGATGATAGAATGGCACGACCTAGTGGTCGATCGGGGCACAACACTCG
AGGAACTGGGTCTTCATCGTCTGGAGTTTTAATGGTTGGACCTAACTTTAGAGTTGGAAAAAAAATTGGATGTGGCAATT
TTGGAGAATTACGATTAGGGAAAAATTTATACACAAATGAATATGTGGCAATTAAGCTGGAGCCCATGAAATCCAGAGCA
CCACAGCTACATTTGGAATACAGATTCTATAAGCAGTTAGGATCTGGAGATGGTATACCTCAAGTTTACTATTTTGGCCC
TTGTGGTAAATACAATGCTATGGTGCTGGAACTGCTGGGACCTAGTTTGGAAGACTTGTTTGACTTGTGTGACAGAACAT
TTTCTCTTAAAACAGTTCTCATGATAGCTATACAACTGACCAAGATTTCTCGCATGGAATATGTCCATTCAAAGAACTTG
ATATACAGAGATGTAAAACCTGAGAACTTCTTAATAGGACGACCAGGAAACAAAACCCAGCAAGTTATTCATATTATAGA
TTTTGGTTTGGCAAAGGAATATATTGATCCAGAGACAAAGAAACACATACCTTACAGAGAACACAAGAGCCTTACAGGAA
CAGCTAGATATATGAGCATAAACACACATTTAGGAAAAGAACAAAGTAGAAGAGATGATTTAGAAGCTTTAGGTCATATG
TTCATGTATTTTCTGAGAGGCAGTCTTCCTTGGCAAGGCTTAAAGGCTGATACATTAAAGGAGAGGTATCAGAAAATTGG
AGATACAAAACGAGCTACACCAATAGAAGTGTTATGTGAAAATTTTCCAGAAGAAATGGCAACATATCTTCGTTATGTAA
GAAGGCTAGATTTTTTTGAAAAACCAGACTATGACTACTTAAGAAAGCTTTTTACTGACTTGTTTGATCGAAAAGGATAT
ATGTTTGATTATGAATATGACTGGATTGGTAAACAGTTGCCTACTCCAGTGGGTGCAGTTCAGCAAGATCCTGCTCTGTC
ATCAAACAGAGAAGCACATCAACACAGAGATAAGATGCAACAATCCAAAAACCAGTCGGCAGACCACAGGGCAACTTGGG
ACTCCCAGCAGGCAAATCCCCACCATTTGAGAGCTCACCTTGCAGCAGACAGACATGGTGGCTCGGTACAGGTTGTAAGT
TCTACAAATGGAGAGTTAAACACAGATGATCCCACTGCAGGACGTTCAAATGCACCCATCACAGCCCCTACTGAAGTAGA
AGTGATGGATGAAACCAACTGCCAGAAAGTGTTGAACATGTGGTGCTGCTGTTTTTTCAAACGAAGGAAAAGGAAAACTA
TACAGCGCCACAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 26 .85 RPM |
| SRP051959_skeletal_muscle | 6 .97 RPM |
| SRP051959_lymph_node | 23 .79 RPM |
| SRP051959_lung | 20 .61 RPM |
| SRP051959_liver | 8 .82 RPM |
| SRP051959_kidney | 22 .12 RPM |
| SRP051959_heart | 16 .15 RPM |
| SRP051959_colon | 21 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017550 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000021121 | other_paralog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006646 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000073563 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011587 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000016677 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2695 | 70.18 | 75.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3279 | 72.00 | 59.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017348 retrocopies