Parental gene: | BCAP29, ENSCJAG00000016329 |
| Aliases: | None |
| Description: | B-cell receptor-associated protein 29 [Source:HGNC Symbol;Acc:24131] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:76167081..76220309(+) |
>ENSCJAG00000016329
ATGACACTCCAATGGGCGGCAGTGGCAACCTTTCTTTATGCCGAAATAGGACTCATTTTAATCTTCTGCCTACCTTTTAT
TCCTCCTCAGAGATGGCAGAAGATTTTTTCATTTAATGTCTGGGGTAAAATTGCAACTTTGTGGAACAAGGCTTTCCTTA
CCATTATCATCCTATTGATTGTTCTATTTCTAGTAATAGATGCTGTGCGAGAAGTAAGGAAATATTCCTCAGTTCATACC
ATTGAGAAGAGTTCCACCAGCAGACCTGATGCATATGAACACACACAGATGAAACTTTTTAGGTCTCAAAGAAATCTTTA
CATTTCTGGATTTTCTCTATTTTTTTGGCTAGTGTTGAGACGTCTGGTTACGCTTATTACTCAACTGGCAAAAGAACTGT
CAAATAAAGGTGTACTTAAAACTCAAGCAGAAAATACTAGCAAGGCTGCCAAAAAATTTTTGGAAGAAAATGAAAAACTA
AAACGGATTTTGAAAAGCCGTGGTAATAATGAAGAATGTGTTTTGGAAGCAGAAAATAAAAAACTAGTAGAAGACCAGGA
GAAACTGAAAACTGAATTAAGGAAGACATCAGATGCCCTTTCTAAGGCACAAAATGATGTGATGGCAATGAAGATGCAAT
CGGAGAGACTTTCAAAAGAATATGATCAACTCCTGAAAGAACACTCTGAACTTCAGCATTCCAGTTTTACAAAAGAAGTA
AGCCACAAAAATGGCAGCATTGGAAAACAGACTGGTTCTAGAAGAGGATTGTTTAGGAAGAGGCAACAAGAAAAGACTCT
GAACTTTACAAAAGATGCTCGCAATATGCCATGTCAAAATGATAAATTTCTTATGTTAGCCTCTAGAAAATTTAAAATTA
AGTTCAGAAAAATGCACTATGACCTGTCAGTTATTTTTTTAATGCCACACATAGGTTGTATTCTAAAGGCATTATCAAGA
TATTTGATGATGTTTCAGATATATTGTAAAGTCTGTATTCCACCTCTTAAGAAATATATAAGCATGTTAAATACCATATT
TACATATTGA
ATGACACTCCAATGGGCGGCAGTGGCAACCTTTCTTTATGCCGAAATAGGACTCATTTTAATCTTCTGCCTACCTTTTAT
TCCTCCTCAGAGATGGCAGAAGATTTTTTCATTTAATGTCTGGGGTAAAATTGCAACTTTGTGGAACAAGGCTTTCCTTA
CCATTATCATCCTATTGATTGTTCTATTTCTAGTAATAGATGCTGTGCGAGAAGTAAGGAAATATTCCTCAGTTCATACC
ATTGAGAAGAGTTCCACCAGCAGACCTGATGCATATGAACACACACAGATGAAACTTTTTAGGTCTCAAAGAAATCTTTA
CATTTCTGGATTTTCTCTATTTTTTTGGCTAGTGTTGAGACGTCTGGTTACGCTTATTACTCAACTGGCAAAAGAACTGT
CAAATAAAGGTGTACTTAAAACTCAAGCAGAAAATACTAGCAAGGCTGCCAAAAAATTTTTGGAAGAAAATGAAAAACTA
AAACGGATTTTGAAAAGCCGTGGTAATAATGAAGAATGTGTTTTGGAAGCAGAAAATAAAAAACTAGTAGAAGACCAGGA
GAAACTGAAAACTGAATTAAGGAAGACATCAGATGCCCTTTCTAAGGCACAAAATGATGTGATGGCAATGAAGATGCAAT
CGGAGAGACTTTCAAAAGAATATGATCAACTCCTGAAAGAACACTCTGAACTTCAGCATTCCAGTTTTACAAAAGAAGTA
AGCCACAAAAATGGCAGCATTGGAAAACAGACTGGTTCTAGAAGAGGATTGTTTAGGAAGAGGCAACAAGAAAAGACTCT
GAACTTTACAAAAGATGCTCGCAATATGCCATGTCAAAATGATAAATTTCTTATGTTAGCCTCTAGAAAATTTAAAATTA
AGTTCAGAAAAATGCACTATGACCTGTCAGTTATTTTTTTAATGCCACACATAGGTTGTATTCTAAAGGCATTATCAAGA
TATTTGATGATGTTTCAGATATATTGTAAAGTCTGTATTCCACCTCTTAAGAAATATATAAGCATGTTAAATACCATATT
TACATATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .69 RPM |
| SRP051959_skeletal_muscle | 15 .18 RPM |
| SRP051959_lymph_node | 5 .39 RPM |
| SRP051959_lung | 7 .97 RPM |
| SRP051959_liver | 6 .37 RPM |
| SRP051959_kidney | 10 .01 RPM |
| SRP051959_heart | 24 .38 RPM |
| SRP051959_colon | 19 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011348 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000008025 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000027511 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013116 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2669 | 92.50 | 99.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016329 retrocopies