Parental gene:

RRM2B, ENSCJAG00000015923

Aliases:None
Description:ribonucleotide reductase M2 B (TP53 inducible) [Source:HGNC Symbol;Acc:17296]
Organism:Marmoset (Callithrix jacchus)
Coordinates:16:92337584..92377898(+)


>ENSCJAG00000015923
ATGGGCGACCCGGAAAGACCAGAAGCGGCCAGGCTGGATCAGGATGAGAGATCATCTGCAGATACCAACGAAAATGAAAT
AAAGTCAAATGAAGAGCCACTTCTAAGAAAGAGTTCTCGCCGGTTTGTCATCTTCCCAATCCAGTACCCCGATATTTGGA
AAATGTATAAACAGGCACAGGCTTCCTTCTGGACAGCAGAAGAGGTGGACTTATCAAAGGATCTCCCTCACTGGAACAAA
CTTAAAGCAGATGAGAAGTATTTCATCTCTCACATCTTAGCCTTTTTTGCAGCCAGTGATGGAATTGTAAATGAAAATTT
GGTGGAGCGCTTTAGTCAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAATGTTC
ACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGATCCCAAGAAAAGGGAATTTTTATTTAATGCCATTGAA
ACCATGCCATATGTTAAGAAAAAAGCAGATTGGGCCTTGCGATGGATAGCAGATAGAAAATCTACTTTTGGGGAAAGAGT
GGTGGCCTTCGCTGCTGTAGAAGGAGTTTTCTTCTCAGGATCTTTTGCTGCTATATTCTGGCTAAAAAAGAGAGGTCTTA
TGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGAGATGAAGGACTTCACTGTGATTTTGCTTGCCTGATGTTTCAA
TACTTAGTAAATAAACCTTCAGAAGAAAGGGTCAGGGAGATCATTGTTGATGCTGTCAAAATCGAGCAGGAGTTTTTAAC
AGAAGCCTTGCCAGTTGGCCTCATTGGAATGAATTGCATTTTGATGAAACAGTACATTGAGTTTGTAGCTGACAGATTAC
TTGTGGAACTTGGATTTTCAAAGTTTTTTCAGGCAGAAAATCCTTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAA
ACAAATTTCTTTGAGAAACGAGTTTCAGAGTATCAGCGTTTTGCAGTTATGGCAGAAACCACAGACAACGTCTTCACCTT
GGATGCAGATTTTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 15 .53 RPM
SRP051959_skeletal_muscle 18 .39 RPM
SRP051959_lymph_node 16 .64 RPM
SRP051959_lung 13 .37 RPM
SRP051959_liver 10 .51 RPM
SRP051959_kidney 12 .78 RPM
SRP051959_heart 15 .56 RPM
SRP051959_colon 6 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012265 ortholog_one2one 4 retrogenes
retro_chof_1118, retro_chof_1233, retro_chof_277, retro_chof_692,
Callithrix jacchus ENSCJAG00000006533 within_species_paralog 3 retrogenes
retro_cjac_2134, retro_cjac_2950, retro_cjac_3851,
Echinops telfairi ENSETEG00000020338 ortholog_one2one 1 retrogene
retro_etel_1219,
Gorilla gorilla ENSGGOG00000003053 ortholog_one2one 1 retrogene
retro_ggor_3001,
Mus musculus ENSMUSG00000022292 ortholog_one2one 1 retrogene
retro_mmus_988,
Otolemur garnettii ENSOGAG00000004487 ortholog_one2one 1 retrogene
retro_ogar_2602,
Pan troglodytes ENSPTRG00000020481 ortholog_one2one 1 retrogene
retro_ptro_3204,
Ictidomys tridecemlineatus ENSSTOG00000008543 ortholog_one2one 2 retrogenes
retro_itri_1555, retro_itri_877,
Tupaia belangeri ENSTBEG00000008855 ortholog_one2one 1 retrogene
retro_tbel_3693,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4130 64.48 51.28
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Download FASTA sequences of all ENSCJAG00000015923 retrocopies