Parental gene: | MYL6B, ENSCJAG00000011620 |
| Aliases: | None |
| Description: | myosin, light chain 6B, alkali, smooth muscle and non-muscle [Source:HGNC Symbol;Acc:29823] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:44899842..44908515(+) |
>ENSCJAG00000011620
ATGCCTCCCAAGAAGGATGTTCCTGTGAAGAAACCAGCAGGGCCCTCCATCTCCAAACCTGCTACTAAGCCAGCAGCAGC
AGGGGCTCCTCCAGCCAAACCCAAAGCTGAGCCAGCTGTCCCCCAGGCCCCTCAGAAAACCCAGGAGCCTCCAGTCGATC
TTTCCAAAGTGGTGATCGAGTTTAACAAGGACCAACTGGAGGAGTTCAAGGAGGCCTTTGAGCTGTTTGACCGAGTGGGG
GATGGCAAGATCCTGTACAGCCAGTGTGGGGACGTGATGAGGGCCCTGGGCCAGAACCCCACCAACGCGGAGGTGCTCAA
GATCCTGGGAAACCCCAAGAGTGATGAGCTGAAGTCCCGGCGTGTGGACTTTGAGACTTTCCTGCCCATGCTCCAGGCAG
TGGCCAAGAACCGGGACCAAGGCACATATGAGGACTACTTGGAGGGGCTTCGTGTGTTTGACAAGGAGGGGAACGGCAAA
GTCATGGGAGCAGAGCTCAGACATGTCCTCACCACCCTCGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTGGTGGC
AGGGCACGAGGACAGCAATGGTTGTATCAACTACGAAGCGTTTGTGAGGCATATCCTGTCGGGGTGA
ATGCCTCCCAAGAAGGATGTTCCTGTGAAGAAACCAGCAGGGCCCTCCATCTCCAAACCTGCTACTAAGCCAGCAGCAGC
AGGGGCTCCTCCAGCCAAACCCAAAGCTGAGCCAGCTGTCCCCCAGGCCCCTCAGAAAACCCAGGAGCCTCCAGTCGATC
TTTCCAAAGTGGTGATCGAGTTTAACAAGGACCAACTGGAGGAGTTCAAGGAGGCCTTTGAGCTGTTTGACCGAGTGGGG
GATGGCAAGATCCTGTACAGCCAGTGTGGGGACGTGATGAGGGCCCTGGGCCAGAACCCCACCAACGCGGAGGTGCTCAA
GATCCTGGGAAACCCCAAGAGTGATGAGCTGAAGTCCCGGCGTGTGGACTTTGAGACTTTCCTGCCCATGCTCCAGGCAG
TGGCCAAGAACCGGGACCAAGGCACATATGAGGACTACTTGGAGGGGCTTCGTGTGTTTGACAAGGAGGGGAACGGCAAA
GTCATGGGAGCAGAGCTCAGACATGTCCTCACCACCCTCGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTGGTGGC
AGGGCACGAGGACAGCAATGGTTGTATCAACTACGAAGCGTTTGTGAGGCATATCCTGTCGGGGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 114 .50 RPM |
| SRP051959_skeletal_muscle | 41 .12 RPM |
| SRP051959_lymph_node | 84 .95 RPM |
| SRP051959_lung | 116 .12 RPM |
| SRP051959_liver | 77 .09 RPM |
| SRP051959_kidney | 108 .98 RPM |
| SRP051959_heart | 131 .80 RPM |
| SRP051959_colon | 122 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000000110 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007592 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000196465 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003277 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000012658 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005214 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000026948 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017368 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001521 | ortholog_one2many | 3 retrogenes | |
| Procavia capensis | ENSPCAG00000005927 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004646 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023043 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000028837 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_113 | 95.95 | 98.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2566 | 76.16 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_2848 | 71.08 | 96.63 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000011620 retrocopies