Parental gene:

SSR4, ENSCJAG00000011167

Aliases:None
Description:signal sequence receptor, delta [Source:HGNC Symbol;Acc:11326]
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:140328788..140331831(+)


>ENSCJAG00000011167
ATGGCGGCGACGGCATTTTTCGGCGCCCTGGCGCTGCTTCTGCTGTCCGGCCTCTCCCACTGCTCAGCCGAGGCCTGCAT
GGAGCCCCAGATCACCCCTTCCTACTACACCACTTCAGACGCCGTCATTTCCACCGAGACTGTCTTCATCGTGGAGATCT
CCCTGACGTGCAAGAACAGGGTCCAGAACATGGCTCTCTATGCTGACGTCAGTGGAAAACAATTTCCTGTCACCCGGGGC
CAGGACGTGGGACGTTATCAGGTGTCCTGGAGCTTGGACCACAAGAGCGCCCATGCAGGTACCTATGAAGTCAGATTCTT
TGACGAGGAGTCCTACAGCCTCCTCAGGAAGGCTCAGAGGAATAACGAGGACATTTCCATCATCTCGCCCCTATTCACAG
TCAGTGTGGACCATCGGGGCACCTGGAATGGGCCCTGGGTGTCCACTGAGGTGCTGGCTGCAGCGATCGGCCTGGTGATC
TACTACCTGGCCTTCAGCGCGAAGACCCACATCCAGGCCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 41 .22 RPM
SRP051959_skeletal_muscle 11 .75 RPM
SRP051959_lymph_node 33 .51 RPM
SRP051959_lung 23 .86 RPM
SRP051959_liver 39 .79 RPM
SRP051959_kidney 42 .07 RPM
SRP051959_heart 13 .75 RPM
SRP051959_colon 31 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000011328 ortholog_one2one 1 retrogene
retro_acar_97,
Dasypus novemcinctus ENSDNOG00000025714 ortholog_one2one 2 retrogenes
retro_dnov_1204, retro_dnov_922,
Homo sapiens ENSG00000180879 ortholog_one2one 1 retrogene
retro_hsap_2536,
Gorilla gorilla ENSGGOG00000024329 ortholog_one2one 1 retrogene
retro_ggor_1585,
Loxodonta africana ENSLAFG00000006908 ortholog_one2one 1 retrogene
retro_lafr_337,
Mustela putorius furo ENSMPUG00000008803 ortholog_one2many 1 retrogene
retro_mputfur_148,
Nomascus leucogenys ENSNLEG00000013602 ortholog_one2one 1 retrogene
retro_nleu_2738,
Otolemur garnettii ENSOGAG00000006738 ortholog_one2one 1 retrogene
retro_ogar_691,
Procavia capensis ENSPCAG00000009037 ortholog_one2one 1 retrogene
retro_pcap_139,
Sus scrofa ENSSSCG00000012784 ortholog_one2one 1 retrogene
retro_sscr_866,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2056 50.53 53.76
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Download FASTA sequences of all ENSCJAG00000011167 retrocopies