Parental gene: | ENSCJAG00000008211 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:11930013..11938956(-) |
>ENSCJAG00000008211
ATGAGGAAGCTCTTCAGCTTTGGGAGACGCCTGGGCCAGGCGGTCCTGCGCTCCATCAATCACGATGAGTACTCGGGTCC
CGGGTACCACATCCAGGACTGGGAACTGCGGAAAATCCACAGGGCGGCCATCAAGGGTGACACCGCGGAGGTGGAGCGCT
GCCTGATGCGCAGGAGCCGAGACGTCGACGCCCGCGACAGGAAGGGCAGGACTCCTCTGCATTTGGCCTGTGCACATGGC
CGTGTGGAAGTGGTCACTCTGTTGGTGAGCAGAAACTGCCGGATTGACATCGATGACAGACTAAACAGGACCCCTTTAAT
GAAGGCTGTGCATGGTCAGGAGGAGGCTTGTTCCATTATTCTGCTGGAACATGGTGCCAATCCAAACATTCAAGATGTCT
TCGGCAACACTGCTCTTCATTATGCTGTATATAATAGCGTGACTTCACTGGCAGAAAAACTGCTCTCCTACCACGCAAAT
ACTGAAGCAATAAACAAGGAGGGAAACACACCACTTTTACTTGCTGTAATTTGCAAGAGACAGAAAATGGTGAAGTTTTT
AGTTAAGAACCAGGCAAATGTACATGCCGTTGACAATTTCAATAGAACAGCCCTCATGCTTGCTTCATATCATGACTTTC
CAAGTATAGTCAGCCTTCTCCTTAAAGAAAATGTTAGTATCTTTTCTCAAGATATGTTTGGACAAACAGCAGAAGATTAT
GCTGTTTATTGTGGTTTGTTAAGGATTCAACAACAAATTTTGGAACATAAGAATAAGATATTTAAACATCATCTT
ATGAGGAAGCTCTTCAGCTTTGGGAGACGCCTGGGCCAGGCGGTCCTGCGCTCCATCAATCACGATGAGTACTCGGGTCC
CGGGTACCACATCCAGGACTGGGAACTGCGGAAAATCCACAGGGCGGCCATCAAGGGTGACACCGCGGAGGTGGAGCGCT
GCCTGATGCGCAGGAGCCGAGACGTCGACGCCCGCGACAGGAAGGGCAGGACTCCTCTGCATTTGGCCTGTGCACATGGC
CGTGTGGAAGTGGTCACTCTGTTGGTGAGCAGAAACTGCCGGATTGACATCGATGACAGACTAAACAGGACCCCTTTAAT
GAAGGCTGTGCATGGTCAGGAGGAGGCTTGTTCCATTATTCTGCTGGAACATGGTGCCAATCCAAACATTCAAGATGTCT
TCGGCAACACTGCTCTTCATTATGCTGTATATAATAGCGTGACTTCACTGGCAGAAAAACTGCTCTCCTACCACGCAAAT
ACTGAAGCAATAAACAAGGAGGGAAACACACCACTTTTACTTGCTGTAATTTGCAAGAGACAGAAAATGGTGAAGTTTTT
AGTTAAGAACCAGGCAAATGTACATGCCGTTGACAATTTCAATAGAACAGCCCTCATGCTTGCTTCATATCATGACTTTC
CAAGTATAGTCAGCCTTCTCCTTAAAGAAAATGTTAGTATCTTTTCTCAAGATATGTTTGGACAAACAGCAGAAGATTAT
GCTGTTTATTGTGGTTTGTTAAGGATTCAACAACAAATTTTGGAACATAAGAATAAGATATTTAAACATCATCTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .82 RPM |
| SRP051959_skeletal_muscle | 0 .17 RPM |
| SRP051959_lymph_node | 0 .07 RPM |
| SRP051959_lung | 0 .21 RPM |
| SRP051959_liver | 0 .26 RPM |
| SRP051959_kidney | 0 .38 RPM |
| SRP051959_heart | 1 .28 RPM |
| SRP051959_colon | 0 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000017899 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000008983 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016858 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019046 | ortholog_many2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000017150 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2331 | 50.80 | 69.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2672 | 51.47 | 50.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000008211 retrocopies