Parental gene: | NAA20, ENSCJAG00000005377 |
| Aliases: | None |
| Description: | N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:15908] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:25624362..25641075(+) |
>ENSCJAG00000005377
ATGACCACGCTCCGGGCCTTCACCTGCGACGATCTGTTCCGCTTCAACAACATTAACTTGGATCCACTTACAGAAACCTA
TGGGATTCCTTTTTACCTACAGTACCTCGCCCACTGGCCGGAGTATTTCATTGTTGCAGAGGCACCTGGTGGAGAATTAA
TGGGTTACATTATGGGTAAAGCAGAAGGCTCAGTAGCTAGGGAAGAATGGCATGGGCACGTCACAGCTCTGTCTGTTGCC
CCAGAATTTCGACGCCTTGGTTTGGCTGCTAAACTTATGGAGTTATTAGAGGAGATTTCAGAGAGAAAGGGTGGTTTTTT
TGTCGATCTCTTTGTAAGAGTATCTAACCAAGTTGCCGTCAACATGTACAAGCAGTTGGGCTACAGTGTATACAGGACAG
TCATAGAGTACTATTCAGCCAGCAATGGAGAGCCTGATGAGGACGCTTATGATATGAGGAAAGCACTTTCCAGGGACATA
GAGAAGAAATCCATCATACCATTACCTCATCCTGTGAGGCCTGAAGACATTGAATAA
ATGACCACGCTCCGGGCCTTCACCTGCGACGATCTGTTCCGCTTCAACAACATTAACTTGGATCCACTTACAGAAACCTA
TGGGATTCCTTTTTACCTACAGTACCTCGCCCACTGGCCGGAGTATTTCATTGTTGCAGAGGCACCTGGTGGAGAATTAA
TGGGTTACATTATGGGTAAAGCAGAAGGCTCAGTAGCTAGGGAAGAATGGCATGGGCACGTCACAGCTCTGTCTGTTGCC
CCAGAATTTCGACGCCTTGGTTTGGCTGCTAAACTTATGGAGTTATTAGAGGAGATTTCAGAGAGAAAGGGTGGTTTTTT
TGTCGATCTCTTTGTAAGAGTATCTAACCAAGTTGCCGTCAACATGTACAAGCAGTTGGGCTACAGTGTATACAGGACAG
TCATAGAGTACTATTCAGCCAGCAATGGAGAGCCTGATGAGGACGCTTATGATATGAGGAAAGCACTTTCCAGGGACATA
GAGAAGAAATCCATCATACCATTACCTCATCCTGTGAGGCCTGAAGACATTGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 18 .95 RPM |
| SRP051959_skeletal_muscle | 38 .52 RPM |
| SRP051959_lymph_node | 19 .31 RPM |
| SRP051959_lung | 20 .50 RPM |
| SRP051959_liver | 24 .84 RPM |
| SRP051959_kidney | 25 .96 RPM |
| SRP051959_heart | 25 .70 RPM |
| SRP051959_colon | 15 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001144 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032025 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004247 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000006044 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007708 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001228 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000002728 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009855 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000015481 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011542 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010746 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013299 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014733 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000000969 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_439 | 92.74 | 74.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1099 | 91.35 | 58.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_1629 | 91.30 | 90.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2984 | 53.06 | 54.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000005377 retrocopies