Parental gene:

ENSCJAG00000003916

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:138371155..138381301(+)


>ENSCJAG00000003916
CTGCTCCGGTCTCCTTGCGGTCCCCAGCTCGGCGACCGGGACGCAGACAAGGACAACAGGTGTTCACGCGAGCTCAGGGG
GCGGCATAGCTGCTGCTCACCCCGGACGACCATGTTGCGCGGCAAGTCCCGGCTCAACGTGGAGTGGCTGGGCTACTCGC
CTGGACTGCTCCTCGAACACAGGCCCCTCCTGGCAGGGCGCACGCCGCCGAGCCACCGCCGAAATGAAAGTTCATTAGCA
TCTACGCTGAAGACGCTCCTGTTCTTCACAGCTTTAATGATCACTGTTCCTATTGGGTTATATTTCACAACTAAATCTTA
TATATTTGAAGGCGCCCTTGGGATGTCCAACAGGGACAGCTATTTTTATGCTGCTATTGTTGCAGTAGTTGCCGTCCATG
TGGTGCTGGCCCTCTTTGTGTATGTGGCCTGGAATGAAGGCTCACGACAGTGGCGTGAAGGCAAACAGGATTAA

Library Parental gene expression (RPM)
SRP051959_spleen 11 .87 RPM
SRP051959_skeletal_muscle 9 .02 RPM
SRP051959_lymph_node 13 .04 RPM
SRP051959_lung 9 .45 RPM
SRP051959_liver 5 .83 RPM
SRP051959_kidney 10 .63 RPM
SRP051959_heart 8 .96 RPM
SRP051959_colon 6 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006296 possible_ortholog 1 retrogene
retro_btau_1106,
Dasypus novemcinctus ENSDNOG00000008426 ortholog_one2one 1 retrogene
retro_dnov_504,
Homo sapiens ENSG00000160131 possible_ortholog 1 retrogene
retro_hsap_3724,
Macaca mulatta ENSMMUG00000009034 possible_ortholog 1 retrogene
retro_mmul_1693,
Mus musculus ENSMUSG00000073131 possible_ortholog 2 retrogenes
retro_mmus_116, retro_mmus_3675,
Nomascus leucogenys ENSNLEG00000013711 possible_ortholog 1 retrogene
retro_nleu_1971,
Oryctolagus cuniculus ENSOCUG00000015201 possible_ortholog 1 retrogene
retro_ocun_443,
Pongo abelii ENSPPYG00000020820 possible_ortholog 1 retrogene
retro_pabe_3133,
Pan troglodytes ENSPTRG00000022372 ortholog_one2one 1 retrogene
retro_ptro_2521,
Rattus norvegicus ENSRNOG00000049744 possible_ortholog 1 retrogene
retro_rnor_2843,
Ictidomys tridecemlineatus ENSSTOG00000011179 possible_ortholog 1 retrogene
retro_itri_500,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_150 98.02 100.00
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Download FASTA sequences of all ENSCJAG00000003916 retrocopies