Parental gene: | CCDC41, ENSCJAG00000002860 |
| Aliases: | None |
| Description: | coiled-coil domain containing 41 [Source:HGNC Symbol;Acc:17966] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:84288836..84478269(-) |
>ENSCJAG00000002860
ATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTACCAGACTCTGAAAGCCGAACACACAAGAATTAG
GTTGCAGAATGAATATGTAAAGTTACAAAATGAACTCAAGCACCTGTTAAATGAAAAGCAAATTCACCAGGAAAAACTTC
AGTTGCTGCTTCAAGAACTAAGAGAAGAATTAGTAGAGAAAACTAAAGACTTAGAAGAAATGAAACTGCAGATATTAACT
CCACAAAAATTGGAATTGCTAAGAGCCCAAATACAACAAGAATTAGAAACTCCAATGAGAGAACGTTTTCGGACTCTGGA
TGAAGAGGTGGAAAAGTATAGAGCTGTATATAATAAACTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACC
AGAAGGAAGAGTTTGCGCGTGTTTTAGAAGAAGGAAAAATAAAATATCAATCAGAGATTGCAAGACTGGAGGAAGATAAA
GAAGAACTACGTAACCAGCTGCTTAATGGTGATCTCACAAGAGACAGCAAACGAGTGGAGCAACTTACTCGAGAAAAAGT
CTATTTGCATCAAAAATTAAAAGGCTTAGAGGCTGAAGTAGCAGAATTAAGGGCTGAAAAGGAGAATTCTGGCGCTCAGG
TAGAAAATGTCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGACTACAGTCAGGTCCCTGGAGGCTGAAAAACAG
TCAGCTAAGCTACGGGCAGAACACTTGGAAAAAGACCTACAATCAAGTAATGAACAAAATACTTGTTTAATTAATAAATT
GCATAAAGCGGAACGAGAAATAAATTCATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACTAGAAATAACAG
ACATCAAACTGGAGGCAGCAAGAGCTAAGAGTGAGCTAGAAAAAGAAAGGAATAAGATTCAAAGTGAACTGGATGGACTA
CAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACACCACAAAGTACTTTTAGTAGAAAAGGATCGTGAGTTAATACG
TAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACAAGATGAAAAGTTAGAACTTGAGAACAAAT
TAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGCAGTCTGAAAAAGATCAGTATGAAGAGAAATTACGG
GCTTCACAGATGGCGGAAGAGATCACTAGGAAGGAACTTCAGAGTATT
ATGTTAATTGATGAAAGGTTACGATGTGAGCATCATAAAGCTAATTACCAGACTCTGAAAGCCGAACACACAAGAATTAG
GTTGCAGAATGAATATGTAAAGTTACAAAATGAACTCAAGCACCTGTTAAATGAAAAGCAAATTCACCAGGAAAAACTTC
AGTTGCTGCTTCAAGAACTAAGAGAAGAATTAGTAGAGAAAACTAAAGACTTAGAAGAAATGAAACTGCAGATATTAACT
CCACAAAAATTGGAATTGCTAAGAGCCCAAATACAACAAGAATTAGAAACTCCAATGAGAGAACGTTTTCGGACTCTGGA
TGAAGAGGTGGAAAAGTATAGAGCTGTATATAATAAACTTCGCTATGAACATACATTTCTCAAGTCAGAATTTGAACACC
AGAAGGAAGAGTTTGCGCGTGTTTTAGAAGAAGGAAAAATAAAATATCAATCAGAGATTGCAAGACTGGAGGAAGATAAA
GAAGAACTACGTAACCAGCTGCTTAATGGTGATCTCACAAGAGACAGCAAACGAGTGGAGCAACTTACTCGAGAAAAAGT
CTATTTGCATCAAAAATTAAAAGGCTTAGAGGCTGAAGTAGCAGAATTAAGGGCTGAAAAGGAGAATTCTGGCGCTCAGG
TAGAAAATGTCCAAAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGACTACAGTCAGGTCCCTGGAGGCTGAAAAACAG
TCAGCTAAGCTACGGGCAGAACACTTGGAAAAAGACCTACAATCAAGTAATGAACAAAATACTTGTTTAATTAATAAATT
GCATAAAGCGGAACGAGAAATAAATTCATTGTCCAGTAAAGTAAAAGAACTTAAACATTCAAACAAACTAGAAATAACAG
ACATCAAACTGGAGGCAGCAAGAGCTAAGAGTGAGCTAGAAAAAGAAAGGAATAAGATTCAAAGTGAACTGGATGGACTA
CAGTCAGACAATGAAATTCTCAAAGCAGCTGTTGAACACCACAAAGTACTTTTAGTAGAAAAGGATCGTGAGTTAATACG
TAAAGTACAAGCTGCCAAAGAAGAAGGTTATCAAAAACTTGTGGTATTACAAGATGAAAAGTTAGAACTTGAGAACAAAT
TAGCAGATTTGGAGAAAATGAAAGTGGAACATGATGTCTGGAGGCAGTCTGAAAAAGATCAGTATGAAGAGAAATTACGG
GCTTCACAGATGGCGGAAGAGATCACTAGGAAGGAACTTCAGAGTATT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 31 .41 RPM |
| SRP051959_skeletal_muscle | 11 .31 RPM |
| SRP051959_lymph_node | 42 .60 RPM |
| SRP051959_lung | 30 .13 RPM |
| SRP051959_liver | 18 .28 RPM |
| SRP051959_kidney | 24 .05 RPM |
| SRP051959_heart | 17 .75 RPM |
| SRP051959_colon | 17 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009750 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000008997 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007859 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1662 | 85.24 | 79.57 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002860 retrocopies