Parental gene:

MRPL11, ENSCJAG00000001470

Aliases:None
Description:mitochondrial ribosomal protein L11 [Source:HGNC Symbol;Acc:14042]
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:122163785..122167359(-)


>ENSCJAG00000001470
ATGTCGAAGGTCAGCCGGGTCAGCCGGGCCACCCGGGCCCTCAGGAAGCCCGAGGTCGGCGGTGTGATCCGGACCATCGT
GCGGGCAGGCCAGGCCATGCCCGGGCCTCCACTAGGCCCAGTGTTGGGTCAGCGAGGTGTTTCCATCAACCAGTTTTGCA
AGGAGTTCAATGAGAGGACAAAGGACATCAAGAAAGGCATTCCTCTGCCTACCAAGATTTTTGTGAAGCCTGACAGAACA
TTTGACATCAAGATTGGACAGCCCACTATTTCCTACTTCCTGAAGGCAGCAGCTGGGATTGAGAAGGGGGCCCGGCAGAC
AGGGAAAGAGGTGGCAGGCCTAGTGACCTTGAAGCATGTGTATGAGATTGCCCTCGTCAAAGCTCAGGATGAGGTATTCG
TCCTGCAGGACGTACCCCTGTCCTCTGTTGTCCGCTCCATCATCGGGTCTGCCCGTTCCATGGGCATTCGTGTGGTGAAG
GACCTCGGTTCAGAAGAGCTTGCAGCTTTCCAGAAGGAACGAGCCATCTTCCTGGCTGCTCAGAAGGAGGCAGATTTGGC
CGCCCAGGAAGAAGCTGCCAAGAAGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 9 .47 RPM
SRP051959_skeletal_muscle 24 .28 RPM
SRP051959_lymph_node 10 .87 RPM
SRP051959_lung 9 .01 RPM
SRP051959_liver 18 .95 RPM
SRP051959_kidney 13 .13 RPM
SRP051959_heart 13 .73 RPM
SRP051959_colon 14 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000012706 ortholog_one2one 1 retrogene
retro_cfam_761,
Dasypus novemcinctus ENSDNOG00000004111 ortholog_one2one 2 retrogenes
retro_dnov_1607, retro_dnov_566,
Echinops telfairi ENSETEG00000015216 ortholog_one2one 2 retrogenes
retro_etel_1754, retro_etel_333,
Homo sapiens ENSG00000174547 ortholog_one2one 1 retrogene
retro_hsap_3390,
Gorilla gorilla ENSGGOG00000001300 ortholog_one2one 1 retrogene
retro_ggor_2296,
Myotis lucifugus ENSMLUG00000004047 ortholog_one2one 1 retrogene
retro_mluc_2131,
Mus musculus ENSMUSG00000024902 ortholog_one2one 1 retrogene
retro_mmus_2118,
Nomascus leucogenys ENSNLEG00000006111 ortholog_one2one 1 retrogene
retro_nleu_1705,
Otolemur garnettii ENSOGAG00000010448 ortholog_one2one 2 retrogenes
retro_ogar_1143, retro_ogar_3159,
Pongo abelii ENSPPYG00000003025 ortholog_one2one 1 retrogene
retro_pabe_2786,
Pan troglodytes ENSPTRG00000003924 ortholog_one2one 1 retrogene
retro_ptro_2305,
Ictidomys tridecemlineatus ENSSTOG00000025971 ortholog_one2one 1 retrogene
retro_itri_941,
Tarsius syrichta ENSTSYG00000008712 ortholog_one2one 1 retrogene
retro_tsyr_1095,
Tursiops truncatus ENSTTRG00000002678 ortholog_one2one 1 retrogene
retro_ttru_431,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_803 92.71 98.46
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Download FASTA sequences of all ENSCJAG00000001470 retrocopies