Parental gene: | DCUN1D1, ENSCHOG00000013358 |
| Aliases: | None |
| Description: | DCN1, defective in cullin neddylation 1, domain containing 1 [Source:HGNC Symbol;Acc:18184] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_336:2886..24043(-) |
>ENSCHOG00000013358
AACAAGTTGAAATCATCGCAGAAGGATAAAGTTCGTCAGTTTATGATCTTCACACAATCTAGTGAAAAAACAGCAGTAAG
TTGTCTGTCTCAAAATGACTGGAAGTTAGATGTTGCAACAGACAATTTTTTCCAAAATCCTGAACTTTATATACGAGAGA
GTGTAAAAGGATCGTTGGACAGAAAGAAATTAGAACAACTATACAATAGATACAAAGATCCTCAAGATGAAAACAAAATT
GGAATAGATGGTATACAGCAGTTCTGTGATGACCTGGCACTTGATCCAGCCAGCATTATTGTGTTGATCATTGCGTGGAA
GTTTAGAGCAGCAACACAGTGTGAATTCTCCAAACAGGAGTTCATGGATGGCATGACAGAATTAGGATGTGACAGCATAG
AAAAACTAAAGGCCCAGATACCCAAGATGGAACAAGAATTGAAAGAACCAGGACGATTTAAGGATTTTTACCAGTTTACT
TTTAATTTTGCAAAGAATCCAGGACAAAAAGGATTAGATCTAGAAATGGCCATTTACTGGAATTTAGTGCTTAATGGAAG
ATTTAAATTCTTAGACTTATGGAATAAATTTTTGGAACATCATAAACGATCAATACCAAAAGATACCTGGAATCTTTTAG
ACTTCAGTACAATGATTGCAGATGACATGTCTAATTATGATGAAGAAGGAGCATGGTCTGTTCTTATTGATGACTTTGTG
GAATTTGCACGCCCTCAAATTGCTGGGACAAAAAGTACAACAGTGTAG
AACAAGTTGAAATCATCGCAGAAGGATAAAGTTCGTCAGTTTATGATCTTCACACAATCTAGTGAAAAAACAGCAGTAAG
TTGTCTGTCTCAAAATGACTGGAAGTTAGATGTTGCAACAGACAATTTTTTCCAAAATCCTGAACTTTATATACGAGAGA
GTGTAAAAGGATCGTTGGACAGAAAGAAATTAGAACAACTATACAATAGATACAAAGATCCTCAAGATGAAAACAAAATT
GGAATAGATGGTATACAGCAGTTCTGTGATGACCTGGCACTTGATCCAGCCAGCATTATTGTGTTGATCATTGCGTGGAA
GTTTAGAGCAGCAACACAGTGTGAATTCTCCAAACAGGAGTTCATGGATGGCATGACAGAATTAGGATGTGACAGCATAG
AAAAACTAAAGGCCCAGATACCCAAGATGGAACAAGAATTGAAAGAACCAGGACGATTTAAGGATTTTTACCAGTTTACT
TTTAATTTTGCAAAGAATCCAGGACAAAAAGGATTAGATCTAGAAATGGCCATTTACTGGAATTTAGTGCTTAATGGAAG
ATTTAAATTCTTAGACTTATGGAATAAATTTTTGGAACATCATAAACGATCAATACCAAAAGATACCTGGAATCTTTTAG
ACTTCAGTACAATGATTGCAGATGACATGTCTAATTATGATGAAGAAGGAGCATGGTCTGTTCTTATTGATGACTTTGTG
GAATTTGCACGCCCTCAAATTGCTGGGACAAAAAGTACAACAGTGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007821 | within_species_paralog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005148 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000022086 | ortholog_one2many | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000019073 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000000166 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000043093 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000010767 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010552 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002369 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027708 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005983 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000658 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015661 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012276 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_232 | 97.67 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_479 | 62.29 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_767 | 68.97 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_812 | 57.30 | 67.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_1054 | 62.74 | 98.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_1129 | 75.68 | 71.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_1198 | 79.17 | 55.69 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_1373 | 90.41 | 56.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_chof_1546 | 61.71 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_chof_1728 | 62.04 | 81.18 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_chof_2049 | 98.13 | 83.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_chof_2329 | 65.38 | 50.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_chof_2369 | 59.61 | 97.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_chof_2373 | 80.61 | 74.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013358 retrocopies