Parental gene: | GPD1L, ENSCHOG00000012633 |
| Aliases: | None |
| Description: | glycerol-3-phosphate dehydrogenase 1-like [Source:HGNC Symbol;Acc:28956] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | scaffold_3267:662..24497(-) |
>ENSCHOG00000012633
GTTGCTGTCTCGAATCTCAGCGAGGCAGTGCAGGATGCAGACCTGCTGGTGTTTGTCATTCCTCACCAATTCATTCACAG
AATCTGTGATGAGATTACTGGAAGGGTGCCCAAAGAAGCGCTGGGAATCACCCTCATCAAGGGGATAGACAAGGGCCCCG
AGGGGCTGAAACTCATTTCCGACATCATCCGAGAGAAGATGGGCATTGACATCAGTGTGCTGATGGGAGCCAACATTGCC
AACGAGGTGGCTGCAGACAAGTTCTGTGAGACCACCATCGGCAGCAAAGTAATGGAGAACGGCCTTCTCTTCAAAGAACT
TCTGCAGACTCCGAATTTTCGAATTACTGTGGTTGATGATGCAGATACTGTTGAACTTTGTGGTGCTCTTAAGAACGTTG
TGGCTGTGGGAGCTGGGTTCTGCGATGGCCTCCGCTGTGGAGACAACACCAAAGCCGCTGTCATCCGCCTGGGCCTCATG
GAAATGATTGCATTTGCCAAGATCTTCTGCAAGGGCCACGTGTCCACAGCCACCTTCCTGGAGAGCTGTGGGGTGGCTGA
CCTGATCACCACCTGCTACGGAGGCCGGAACCGCAGGGTGGCCGAGGCGTTCGCCAGGACTGGAAAGACCATTGAAGAAC
TGGAGAACGAGATGCTGAATGGGCAGAAACTCCAAGGACCTCAGACTTCTGCTGAAGTGTACCGCATCCTCAAACAGAAG
GGCCTGGTCGACAAGTTTCCATTGTTTACTGCAGTATATCAGATCTGCTACGAAGGGAAATCTGTTCAAGATATGTTGTC
TTGTCTCCAGAGTCATCCACAGCATAAATAA
GTTGCTGTCTCGAATCTCAGCGAGGCAGTGCAGGATGCAGACCTGCTGGTGTTTGTCATTCCTCACCAATTCATTCACAG
AATCTGTGATGAGATTACTGGAAGGGTGCCCAAAGAAGCGCTGGGAATCACCCTCATCAAGGGGATAGACAAGGGCCCCG
AGGGGCTGAAACTCATTTCCGACATCATCCGAGAGAAGATGGGCATTGACATCAGTGTGCTGATGGGAGCCAACATTGCC
AACGAGGTGGCTGCAGACAAGTTCTGTGAGACCACCATCGGCAGCAAAGTAATGGAGAACGGCCTTCTCTTCAAAGAACT
TCTGCAGACTCCGAATTTTCGAATTACTGTGGTTGATGATGCAGATACTGTTGAACTTTGTGGTGCTCTTAAGAACGTTG
TGGCTGTGGGAGCTGGGTTCTGCGATGGCCTCCGCTGTGGAGACAACACCAAAGCCGCTGTCATCCGCCTGGGCCTCATG
GAAATGATTGCATTTGCCAAGATCTTCTGCAAGGGCCACGTGTCCACAGCCACCTTCCTGGAGAGCTGTGGGGTGGCTGA
CCTGATCACCACCTGCTACGGAGGCCGGAACCGCAGGGTGGCCGAGGCGTTCGCCAGGACTGGAAAGACCATTGAAGAAC
TGGAGAACGAGATGCTGAATGGGCAGAAACTCCAAGGACCTCAGACTTCTGCTGAAGTGTACCGCATCCTCAAACAGAAG
GGCCTGGTCGACAAGTTTCCATTGTTTACTGCAGTATATCAGATCTGCTACGAAGGGAAATCTGTTCAAGATATGTTGTC
TTGTCTCCAGAGTCATCCACAGCATAAATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009826 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000013996 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011060 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000050627 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010093 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013243 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016132 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000026455 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021977 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_306 | 83.02 | 57.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_340 | 77.52 | 78.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_620 | 98.75 | 57.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_724 | 74.37 | 99.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_1033 | 94.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000012633 retrocopies