Parental gene: | RPS3A, ENSCHOG00000007238 |
| Aliases: | None |
| Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_4360:20714..24109(+) |
>ENSCHOG00000007238
GTTGATCCATTTTCTAAGAAAGATTGGTATGATGTGAAAGCACCAGCAATGTTTAATATAAGAAATATTGGGAAAACACT
AGTTACAAGGACTCAAGGAACCAAAATTGCATCTGATGGCCTTAAGGGTCGTGTTTTTGAAGTGAGCCTTGCTGATCTGC
AGAATGATGAAGTTGCATTTAGAAAATTCAAGCTAATTACTGAGGATGTGCAGGGCAAAAACTGCCTAACCAACTTCCAT
GGCATGGATCTTACCCGTGACAAAATGTGTTCCATGGTTAAAAAATGGCAGACCATGATTGAAGCTCATGTCGATGTCAA
AACTACCGATGGTTATTTGCTTCGTCTTTTCTGTGTTGGTTTTACCAAAAAACGCAACAATCAGATTCGGAAGACCTCTT
ACGCTCAGCACCAACAGGTCCGCCAAATCCGGAAAAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTG
AAAGAAGTGGTCAATAAATTGATTCCAGACAGCATTGGTAAAGACATAGAAAAGGCTTGCCAATCTATCTATCCTCTCCA
TGATGTGTTTGTTAGAAAAGTAAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGCTTCACGGTGAAG
GTAGTAGTTCTGGAAAAGCAACTGGAGATGAGACAGGTGCTAAAGTGGAACGAGCTGATGGTTATGAGCCACCAGTCCAA
GAATCTGTTTAA
GTTGATCCATTTTCTAAGAAAGATTGGTATGATGTGAAAGCACCAGCAATGTTTAATATAAGAAATATTGGGAAAACACT
AGTTACAAGGACTCAAGGAACCAAAATTGCATCTGATGGCCTTAAGGGTCGTGTTTTTGAAGTGAGCCTTGCTGATCTGC
AGAATGATGAAGTTGCATTTAGAAAATTCAAGCTAATTACTGAGGATGTGCAGGGCAAAAACTGCCTAACCAACTTCCAT
GGCATGGATCTTACCCGTGACAAAATGTGTTCCATGGTTAAAAAATGGCAGACCATGATTGAAGCTCATGTCGATGTCAA
AACTACCGATGGTTATTTGCTTCGTCTTTTCTGTGTTGGTTTTACCAAAAAACGCAACAATCAGATTCGGAAGACCTCTT
ACGCTCAGCACCAACAGGTCCGCCAAATCCGGAAAAAGATGATGGAAATCATGACCCGAGAGGTGCAGACAAATGACTTG
AAAGAAGTGGTCAATAAATTGATTCCAGACAGCATTGGTAAAGACATAGAAAAGGCTTGCCAATCTATCTATCCTCTCCA
TGATGTGTTTGTTAGAAAAGTAAAAATGCTGAAGAAGCCCAAGTTTGAATTGGGAAAACTCATGGAGCTTCACGGTGAAG
GTAGTAGTTCTGGAAAAGCAACTGGAGATGAGACAGGTGCTAAAGTGGAACGAGCTGATGGTTATGAGCCACCAGTCCAA
GAATCTGTTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000021821 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000969 | ortholog_one2one | 6 retrogenes | |
| Mus musculus | ENSMUSG00000028081 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000011893 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015088 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000013094 | ortholog_one2one | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_126 | 92.95 | 63.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_220 | 76.87 | 53.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_342 | 99.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_370 | 86.67 | 74.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_685 | 90.45 | 64.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_824 | 97.59 | 68.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_826 | 97.90 | 97.94 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_912 | 75.61 | 50.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_chof_1076 | 87.08 | 85.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_chof_1092 | 88.17 | 68.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_chof_1207 | 76.58 | 64.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_chof_1309 | 83.06 | 50.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_chof_1311 | 87.58 | 62.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_chof_1341 | 97.81 | 56.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_chof_1362 | 92.31 | 90.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_chof_1377 | 70.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_chof_1393 | 93.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_chof_1395 | 78.81 | 61.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_chof_1441 | 90.31 | 92.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_chof_1488 | 97.94 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_chof_1490 | 95.06 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_chof_1598 | 85.07 | 55.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_chof_1626 | 95.24 | 51.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_chof_2056 | 99.59 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_chof_2179 | 72.41 | 58.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_chof_2201 | 89.31 | 52.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_chof_2282 | 98.35 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_chof_2417 | 90.95 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_chof_2465 | 89.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_chof_2500 | 97.02 | 68.31 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_chof_2613 | 88.02 | 68.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_chof_2628 | 91.30 | 56.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_chof_2635 | 85.71 | 57.61 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_chof_2668 | 65.93 | 55.56 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000007238 retrocopies