Parental gene:

ENSCHOG00000004014

Aliases:None
Description:None
Organism:Sloth (Choloepus hoffmanni)
Coordinates:scaffold_88821:1104..3828(-)


>ENSCHOG00000004014
GAGATGGATCAGACAATGGCTGCCAATGCTCAGAAGAATAAATTCTTGGTTGATGGGTTTCCAAGAAATGAAGACAACCT
TCAAGGTTGGAATAAGACCATGGATGGGAAGGCAGATGTAGCTTTTGTTCTGTTTTTTGACTGTAATAACGAGATCTGTA
TTCAACGATGCCTTGAAAGGGGAAAGAGTAGTGGTAGGACTGATGACAACAGAGAGAGCTTGGAAAAGAGAATTCAGACC
TATCTTCAGTCAACAAAGCCAATTATTGACTTATATGAGGAAATGGGGAAAGTCAAGAAAATAGATGCTTCTAAGTCTGT
TGATGAAGTTTTTGATGAAGTTGTGAAGATTTTTGACAAAGAAGGCTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000012 ortholog_one2many 2 retrogenes
retro_amel_1074, retro_amel_1711,
Canis familiaris ENSCAFG00000004030 possible_ortholog 1 retrogene
retro_cfam_1729,
Callithrix jacchus ENSCJAG00000021250 ortholog_one2many 2 retrogenes
retro_cjac_2652, retro_cjac_2992,
Cavia porcellus ENSCPOG00000014747 possible_ortholog 4 retrogenes
retro_cpor_1070, retro_cpor_1295, retro_cpor_417, retro_cpor_799,
Felis catus ENSFCAG00000025426 ortholog_one2many 1 retrogene
retro_fcat_1259,
Macaca mulatta ENSMMUG00000017375 ortholog_many2many 2 retrogenes
retro_mmul_1572, retro_mmul_66,
Mustela putorius furo ENSMPUG00000012394 possible_ortholog 1 retrogene
retro_mputfur_1061,
Mus musculus ENSMUSG00000028719 possible_ortholog 1 retrogene
retro_mmus_2576,
Otolemur garnettii ENSOGAG00000026904 ortholog_one2many 2 retrogenes
retro_ogar_1589, retro_ogar_3204,
Pongo abelii ENSPPYG00000001380 ortholog_one2many 1 retrogene
retro_pabe_1369,
Rattus norvegicus ENSRNOG00000007775 possible_ortholog 1 retrogene
retro_rnor_1940,
Sorex araneus ENSSARG00000009745 ortholog_one2many 2 retrogenes
retro_sara_199, retro_sara_294,
Sus scrofa ENSSSCG00000003885 possible_ortholog 1 retrogene
retro_sscr_454,
Tupaia belangeri ENSTBEG00000017494 ortholog_one2many 2 retrogenes
retro_tbel_3597, retro_tbel_691,
Tarsius syrichta ENSTSYG00000007511 ortholog_one2many 1 retrogene
retro_tsyr_319,
Vicugna pacos ENSVPAG00000004127 ortholog_one2many 2 retrogenes
retro_vpac_345, retro_vpac_373,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_609 77.03 60.66
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2. retro_chof_840 84.91 86.89
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Download FASTA sequences of all ENSCHOG00000004014 retrocopies